added mkdir

biosimulators · Jan 21, 2024 · 5089a12 · 5089a12
1 parent fb2e521
commit 5089a12
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Showing 2 changed files with 5 additions and 2 deletions.
diff --git a/biosimulators_simularium/tests/run.py b/biosimulators_simularium/tests/run.py
@@ -14,4 +14,4 @@
 if __name__ == '__main__':
     #mol_output = generate_output(dir_fp=MIN_E_DIR)
     #mesh = generate_interpolated_mesh(mol_output=mol_output)
-    test_simple_execute(OUTPUT_DIR, MIN_E_DIR, DOC_NAME, USE_JSON)
+    test_simple_execute(MIN_E_DIR, DOC_NAME, USE_JSON, output_dir=OUTPUT_DIR)
diff --git a/biosimulators_simularium/tests/test_simple.py b/biosimulators_simularium/tests/test_simple.py
@@ -19,14 +19,17 @@ def assert_clause(clause: bool) -> int:
         return 1
 
 
+OUTPUT_DIR = 'Biosimulators_simularium/OUTPUT'
 MIN_E_DIR = 'biosimulators_simularium/tests/fixtures/MinE'
 CROWDING_DIR = 'biosimulators_simularium/tests/fixtures/crowding'
 DOC_TEST_NAME = 'simularium'
 USE_JSON = True
 
 
-def test_simple_execute(output_dir: str, archive_root=MIN_E_DIR, test_name=DOC_TEST_NAME, json=USE_JSON):
+def test_simple_execute(output_dir=OUTPUT_DIR, archive_root=MIN_E_DIR, test_name=DOC_TEST_NAME, json=USE_JSON):
     archive_root = MIN_E_DIR
+    if not os.path.exists(OUTPUT_DIR):
+        os.mkdir(OUTPUT_DIR)
     execute(working_dir=archive_root, use_json=json, output_dir=output_dir)
     assert_clause(os.path.exists(os.path.join(archive_root, test_name + '.simularium')))