test 1-1 uniprot mapping

biothings · Oct 3, 2024 · 3179e29 · 3179e29
1 parent 3eb1c67
commit 3179e29
Show file tree

Hide file tree

Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/src/hub/dataload/sources/chembl/parser.py b/src/hub/dataload/sources/chembl/parser.py
@@ -20,10 +20,10 @@ def parse_data(data):
                 uniprot_accessions.append(accession)
         if uniprot_accessions:
             output = {
-                "_id": item["target_chembl_id"],
+                "_id": uniprot_accessions[0],
                 "chembl_target": item["target_chembl_id"],
                 "xrefs": {
-                    "accession": uniprot_accessions,
+                    "accession": uniprot_accessions[0],
                 },
             }
             yield output

diff --git a/src/hub/dataload/sources/chembl/upload.py b/src/hub/dataload/sources/chembl/upload.py
@@ -17,7 +17,7 @@ class ChemblUploader(uploader.BaseSourceUploader):
 
     keylookup = MyGeneKeyLookup(
         input_types=[
-            ["swissprot", "chembl.xrefs.accession"],
+            ("swissprot", "chembl.xrefs.accession"),
         ],
         skip_on_failure=True,
     )