update build

boettiger-lab · Oct 9, 2024 · 1b7ccec · 1b7ccec
1 parent 825815e
commit 1b7ccec
Show file tree

Hide file tree

Showing 2 changed files with 12 additions and 7 deletions.
diff --git a/images/Dockerfile.gpu b/images/Dockerfile.gpu
@@ -8,12 +8,6 @@ USER root
 RUN curl -L https://ollama.com/download/ollama-linux-amd64.tgz -o ollama-linux-amd64.tgz && tar -C /usr -xzf ollama-linux-amd64.tgz
 
 RUN curl -fsSL https://code-server.dev/install.sh | sh && rm -rf .cache
-RUN git config --system pull.rebase false && \
-    echo '"\e[5~": history-search-backward' >> /etc/inputrc && \
-    echo '"\e[6~": history-search-forward' >> /etc/inputrc
-
-#git config --system credential.helper 'cache --timeout=30000' && \
-
 RUN apt-get update -qq && apt-get -y install vim git-lfs
 
 # install codeserver
@@ -22,6 +16,15 @@ RUN curl -fsSL https://code-server.dev/install.sh | sh && rm -rf .cache
 # ollama
 RUN curl -L https://ollama.com/download/ollama-linux-amd64.tgz -o ollama-linux-amd64.tgz && tar -C /usr -xzf ollama-linux-amd64.tgz
 
+
+RUN git config --system pull.rebase false && \
+    git config --system credential.credentialStore 'cache --timeout=30000' && \
+    echo '"\e[5~": history-search-backward' >> /etc/inputrc && \
+    echo '"\e[6~": history-search-forward' >> /etc/inputrc
+
+RUN wget https://github.com/git-ecosystem/git-credential-manager/releases/download/v2.6.0/gcm-linux_amd64.2.6.0.deb && dpkg -i gcm-*.deb && rm gcm-*.deb
+
+
 USER ${NB_USER}
 COPY spatial-env.yml spatial-env.yml
 RUN conda update -n base -c conda-forge conda && \

diff --git a/images/spatial-env.yml b/images/spatial-env.yml
@@ -9,7 +9,8 @@ dependencies:
   - fsspec
   - geopandas
   - geocube
-  - leafmap[maplibregl]
+  - leafmap
+  - libgdal-arrow-parquet
   - localtileserver
   - mapclassify
   - maplibre
@@ -32,6 +33,7 @@ dependencies:
   - rioxarray
   - stackstac
   - streamlit
+  - tippecanoe
   - tqdm
   - xarray
   - zarr