[AJ-1784] Update logback-classic from 1.5.7 to 1.5.8 #542
Workflow file for this run
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| # Github action to Build Orch, add/promote semantic tagging and then run tests | |
| name: orch-build-tag-publish-and-run-tests | |
| on: | |
| pull_request: | |
| paths-ignore: ['**.md'] | |
| push: | |
| branches: | |
| - develop | |
| paths-ignore: ['**.md'] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.head_ref || github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| GCR_REGISTRY: gcr.io/broad-dsp-gcr-public/firecloud-orchestration | |
| # Region-specific Google Docker repository where GOOGLE_PROJECT/REPOSITORY_NAME can be found | |
| GOOGLE_DOCKER_REPOSITORY: us-central1-docker.pkg.dev | |
| RUN_NAME: '${{ github.event.repository.name }}-${{ github.run_id }}-${{ github.run_attempt }}' | |
| jobs: | |
| orch-build-tag-publish-job: | |
| runs-on: ubuntu-latest | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| outputs: | |
| tag: ${{ steps.tag.outputs.tag }} | |
| custom-version-json: ${{ steps.publish-orch.outputs.custom-version-json }} | |
| steps: | |
| - uses: 'actions/checkout@v4' | |
| - name: Bump the tag to a new version | |
| uses: databiosphere/github-actions/actions/[email protected] | |
| id: tag | |
| env: | |
| DEFAULT_BUMP: patch | |
| GITHUB_TOKEN: ${{ secrets.BROADBOT_TOKEN }} | |
| RELEASE_BRANCHES: develop | |
| WITH_V: true | |
| # Persist output tag from bumper to $GITHUB_ENV. | |
| - id: persist-tag | |
| name: Persist tag | |
| run: | | |
| echo "DOCKER_TAG=${{ steps.tag.outputs.tag }}" >> $GITHUB_ENV | |
| - name: Auth to GCP | |
| id: 'auth' | |
| uses: google-github-actions/auth@v2 | |
| with: | |
| token_format: 'id_token' | |
| workload_identity_provider: 'projects/1038484894585/locations/global/workloadIdentityPools/github-wi-pool/providers/github-wi-provider' | |
| service_account: '[email protected]' | |
| id_token_audience: "1038484894585-k8qvf7l876733laev0lm8kenfa2lj6bn.apps.googleusercontent.com" | |
| # Install gcloud, `setup-gcloud` automatically picks up authentication from `auth`. | |
| - name: 'Set up Cloud SDK' | |
| uses: 'google-github-actions/setup-gcloud@v2' | |
| - name: Explicitly auth Docker for Artifact Registry | |
| run: gcloud auth configure-docker $GOOGLE_DOCKER_REPOSITORY --quiet | |
| # Build Orch jar | |
| - name: Build Orch jar | |
| run: | | |
| cd $GITHUB_WORKSPACE | |
| ./script/build_jar.sh | |
| # Publish jar to GCR | |
| - id: publish-orch | |
| name: Publish Orch | |
| run: | | |
| cd $GITHUB_WORKSPACE | |
| docker build -t ${{ github.event.repository.full_name }}:${DOCKER_TAG} --pull . | |
| docker tag ${{ github.event.repository.full_name }}:${DOCKER_TAG} ${{ env.GCR_REGISTRY }}:${DOCKER_TAG} | |
| gcloud docker -- push $GCR_REGISTRY:${DOCKER_TAG} | |
| echo 'custom-version-json={\"firecloudorch\":{\"appVersion\":\"${{ env.DOCKER_TAG }}\"}}' >> $GITHUB_OUTPUT | |
| prepare-configs: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| log-results: ${{ steps.prepare-outputs.outputs.log-results }} | |
| test-context: ${{ steps.prepare-outputs.outputs.test-context }} | |
| steps: | |
| - id: prepare-outputs | |
| run: |- | |
| echo 'log-results=true' >> $GITHUB_OUTPUT | |
| if ${{ github.ref_name == 'develop' }}; then | |
| echo 'test-context=dev-merge' >> $GITHUB_OUTPUT | |
| else | |
| echo 'test-context=pr-test' >> $GITHUB_OUTPUT | |
| fi | |
| report-to-sherlock: | |
| # Report new firecloudorch version to Broad DevOps | |
| uses: broadinstitute/sherlock/.github/workflows/client-report-app-version.yaml@main | |
| needs: orch-build-tag-publish-job | |
| with: | |
| new-version: ${{ needs.orch-build-tag-publish-job.outputs.tag }} | |
| chart-name: 'firecloudorch' | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| set-version-in-dev: | |
| # Put new firecloudorch version in Broad dev environment | |
| uses: broadinstitute/sherlock/.github/workflows/client-set-environment-app-version.yaml@main | |
| needs: [orch-build-tag-publish-job, report-to-sherlock] | |
| if: ${{ github.ref_name == 'develop' }} | |
| with: | |
| new-version: ${{ needs.orch-build-tag-publish-job.outputs.tag }} | |
| chart-name: 'firecloudorch' | |
| environment-name: 'dev' | |
| secrets: | |
| sync-git-token: ${{ secrets.BROADBOT_TOKEN }} | |
| permissions: | |
| id-token: 'write' | |
| create-bee-workflow: | |
| strategy: | |
| matrix: | |
| terra-env: [ dev ] # what versions of apps do we use to emulate types of environments | |
| runs-on: ubuntu-latest | |
| needs: [orch-build-tag-publish-job] | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| steps: | |
| - name: Echo Orch version | |
| run: | | |
| echo '${{ needs.orch-build-tag-publish-job.outputs.custom-version-json }}' | |
| - name: dispatch to terra-github-workflows | |
| uses: broadinstitute/workflow-dispatch@v4 | |
| with: | |
| workflow: bee-create | |
| run-name: "bee-create-${{ env.RUN_NAME }}" | |
| repo: broadinstitute/terra-github-workflows | |
| ref: refs/heads/main | |
| token: ${{ secrets.BROADBOT_TOKEN}} # github token for access to kick off a job in the private repo | |
| # manually recalculate b/c env context is broken https://github.com/actions/runner/issues/480 | |
| # Note: There is a hard limit of bee-name not exceeding 32 characters | |
| inputs: '{ | |
| "bee-name": "orch-${{ github.run_id }}-${{ matrix.terra-env }}", | |
| "version-template": "${{ matrix.terra-env }}", | |
| "custom-version-json": "${{ needs.orch-build-tag-publish-job.outputs.custom-version-json }}", | |
| "run-name": "bee-create-${{ env.RUN_NAME }}" | |
| }' | |
| orch-swat-test-job: | |
| strategy: | |
| matrix: | |
| terra-env: [ dev ] # what versions of apps do we use to emulate types of environments | |
| testing-env: [ qa ] # what env resources to use, e.g. SA keys | |
| runs-on: ubuntu-latest | |
| needs: [create-bee-workflow] | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| steps: | |
| - name: dispatch to terra-github-workflows | |
| uses: broadinstitute/workflow-dispatch@v4 | |
| with: | |
| workflow: orch-swat-tests | |
| repo: broadinstitute/terra-github-workflows | |
| ref: refs/heads/main | |
| token: ${{ secrets.BROADBOT_TOKEN}} # github token for access to kick off a job in the private repo | |
| # manually recalculate b/c env context is broken https://github.com/actions/runner/issues/480 | |
| inputs: '{ | |
| "bee-name": "orch-${{ github.run_id }}-${{ matrix.terra-env }}", | |
| "ENV": "${{ matrix.testing-env }}", | |
| "test-context": "${{ needs.prepare-configs.outputs.test-context }}", | |
| "ref": "${{ github.head_ref }}" | |
| }' | |
| # github.head_ref, used above, is only populated for PRs and will be blank when merging to develop. | |
| # This is ok; the orch-swat-tests workflow uses "develop" as a default when receiving a blank value. | |
| destroy-bee-workflow: | |
| strategy: | |
| matrix: | |
| terra-env: [ dev ] # what versions of apps do we use to emulate types of environments | |
| runs-on: ubuntu-latest | |
| needs: [orch-swat-test-job] | |
| if: always() # always run to confirm bee is destroyed | |
| permissions: | |
| contents: 'read' | |
| id-token: 'write' | |
| steps: | |
| - name: dispatch to terra-github-workflows | |
| uses: broadinstitute/workflow-dispatch@v4 | |
| with: | |
| workflow: bee-destroy | |
| run-name: "bee-destroy-${{ env.RUN_NAME }}" | |
| repo: broadinstitute/terra-github-workflows | |
| ref: refs/heads/main | |
| token: ${{ secrets.BROADBOT_TOKEN}} # github token for access to kick off a job in the private repo | |
| # manually recalculate b/c env context is broken https://github.com/actions/runner/issues/480 | |
| inputs: '{ | |
| "bee-name": "orch-${{ github.run_id }}-${{ matrix.terra-env }}", | |
| "run-name": "bee-destroy-${{ env.RUN_NAME }}" | |
| }' | |
| wait-for-completion: false |