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Workflow file for this run

name: unit tests
# Run the test suite on pushes (incl. merges) to main
# Run the test suite when a PR is opened, pushed to, or reopened
on:
push:
branches:
- main
- dev
pull_request:
types: [opened, synchronize, reopened]
jobs:
unit_tests:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ['3.10']
steps:
- name: Checkout
uses: actions/checkout@v3
with:
fetch-depth: 0
- name: Set up chart-testing
uses: helm/[email protected]
- name: Add repos
run: |
helm repo add bitnami https://charts.bitnami.com/bitnami
helm repo add seqr-helm https://broadinstitute.github.io/seqr-helm
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v4
with:
python-version: ${{ matrix.python-version }}
- name: Chart Lint
run: ct lint --all
- name: Create kind cluster
uses: helm/[email protected]
with:
cluster_name: "kind"
config: "kind.yaml"
- name: Run Chart Templating Unit Tests
run: python3 -m unittest unit_test/**/*.py
- name: Test Seqr Chart Installation
run: |
# Add secrets
kubectl create secret generic postgres-secrets --from-literal=password='super-secure-password'
kubectl create secret generic seqr-secrets --from-literal=django_key='securely-generated-key'
ct install --charts charts/seqr --namespace default