Update pipeline-runner chart appVersion to e0c129a3daa4f69e7b53919012… #684
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name: unit tests | |
# Run the test suite on pushes (incl. merges) to main | |
# Run the test suite when a PR is opened, pushed to, or reopened | |
on: | |
push: | |
branches: | |
- main | |
- dev | |
pull_request: | |
types: [opened, synchronize, reopened] | |
jobs: | |
unit_tests: | |
runs-on: ubuntu-latest | |
strategy: | |
matrix: | |
python-version: ['3.10'] | |
steps: | |
- name: Checkout | |
uses: actions/checkout@v3 | |
with: | |
fetch-depth: 0 | |
- name: Set up chart-testing | |
uses: helm/[email protected] | |
- name: Add repos | |
run: | | |
helm repo add bitnami https://charts.bitnami.com/bitnami | |
helm repo add seqr-helm https://broadinstitute.github.io/seqr-helm | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v4 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Chart Lint | |
run: ct lint --all | |
- name: Create folder | |
run: sudo mkdir -p /var/seqr; sudo chmod 777 /var/seqr | |
- name: Create kind cluster | |
uses: helm/[email protected] | |
with: | |
cluster_name: "kind" | |
config: "kind.yaml" | |
- name: Run Chart Templating Unit Tests | |
run: python3 -m unittest unit_test/**/*.py | |
- name: Test Seqr Chart Installation | |
run: | | |
# Add secrets | |
kubectl create secret generic postgres-secrets --from-literal=password='super-secure-password' | |
kubectl create secret generic seqr-secrets --from-literal=django_key='securely-generated-key' | |
ct install --charts charts/seqr --namespace default --helm-extra-args '--timeout 500s' | |