Fix bugs

broadinstitute · Jan 9, 2024 · 2dbe9a6 · 2dbe9a6
1 parent 6e7351f
commit 2dbe9a6
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Showing 2 changed files with 3 additions and 3 deletions.
diff --git a/charts/hail-search/Chart.yaml b/charts/hail-search/Chart.yaml
@@ -21,7 +21,7 @@ type: application
 # This is the chart version. This version number should be incremented each time you make changes
 # to the chart and its templates, including the app version.
 # Versions are expected to follow Semantic Versioning (https://semver.org/)
-version: 0.1.19
+version: 0.1.20
 
 # This is the version number of the application being deployed. This version number should be
 # incremented each time you make changes to the application. Versions are not expected to

diff --git a/charts/hail-search/values.yaml b/charts/hail-search/values.yaml
@@ -45,7 +45,7 @@ initContainers: |-
         name: datasets
   - name: mkdir-ssd-{{ $path | replace "/" "-" | replace "_" "-" | lower}}
     image: busybox:1.35
-    command: ['/bin/mkdir', '-p', '{{ $.Values.environment.DATASETS_DIR }}/{{ $path | replace "SV" "SV_WGS" | replace "GCNV" "SV_WES"}}/families']
+    command: ['/bin/mkdir', '-p', '{{ $.Values.environment.SSD_DATASETS_DIR }}/{{ $path | replace "SV" "SV_WGS" | replace "GCNV" "SV_WES"}}/families']
     volumeMounts:
       - mountPath: {{ $.Values.environment.SSD_DATASETS_DIR }}
         name: ssd-datasets
@@ -69,7 +69,7 @@ initContainers: |-
         name: datasets
   - name: sync-families-{{ $path | replace "/" "-" | replace "_" "-" | lower}}
     image: gcr.io/google.com/cloudsdktool/google-cloud-cli:latest
-    command: ['gsutil', '-m', 'rsync', '-r', '{{ $.Values.global.hail_search.sourceDatasetsDir }}/{{ $path }}/runs/{{ $version }}/families', '{{ $.Values.environment.DATASETS_DIR }}/{{ $path | replace "SV" "SV_WGS" | replace "GCNV" "SV_WES"}}/families']
+    command: ['gsutil', '-m', 'rsync', '-r', '{{ $.Values.global.hail_search.sourceDatasetsDir }}/{{ $path }}/runs/{{ $version }}/families', '{{ $.Values.environment.SSD_DATASETS_DIR }}/{{ $path | replace "SV" "SV_WGS" | replace "GCNV" "SV_WES"}}/families']
     volumeMounts:
       - mountPath: {{ $.Values.environment.SSD_DATASETS_DIR }}
         name: ssd-datasets