fix

broadinstitute · Oct 7, 2024 · ceaa3f7 · ceaa3f7
1 parent 5025b8e
commit ceaa3f7
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/3rd-party-tools/slide-tags/Dockerfile b/3rd-party-tools/slide-tags/Dockerfile
@@ -82,16 +82,16 @@ RUN apt-get update ; \
                              'SeuratObject'), repos='http://cran.rstudio.com/')" ; \
 
     R -e "if (!require('BiocManager',quietly=T)) {install.packages('BiocManager',repos='http://cran.rstudio.com/')}; \
-          BiocManager::install('rhdf5')" 
+          BiocManager::install('rhdf5')" ; \
 
     # Install micromamba
     # curl -Ls https://micro.mamba.pm/api/micromamba/linux-64/latest | tar -xvj bin/micromamba
-    # "${SHELL}" <(curl -L micro.mamba.pm/install.sh)
+    "${SHELL}" <(curl -L micro.mamba.pm/install.sh)
 
     # Install python + pip + jupyter
     # RUN sudo ln -s /usr/bin/python3 /usr/bin/python
     # RUN sudo apt-get update && sudo apt-get install python3-pip
     # RUN pip install jupyterlab
 
 # Added to copy julia script to docker image
-# COPY spatial-count.jl .
+COPY spatial-count.jl .