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address #9

address #9 #56

Workflow file for this run

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}
name: ${{ matrix.config.os }} (${{ matrix.config.r }})
strategy:
fail-fast: false
matrix:
config:
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes
steps:
- uses: actions/checkout@v3
- name: set up docker-compose V2
run: |
VERSION=$(curl --silent https://api.github.com/repos/docker/compose/releases/latest | grep -Po '"tag_name": "\K.*\d')
curl -SL https://github.com/docker/compose/releases/download/${VERSION}/docker-compose-$(uname -s)-$(uname -m) -o docker-compose2
chmod +x docker-compose2
wget https://raw.githubusercontent.com/JBGruber/amcat4docker/main/docker-compose.yml
- name: start amcat docker containers
run: |
./docker-compose2 up -d --pull="missing" --quiet-pull
rm docker-compose.yml docker-compose2
sleep 30
- uses: r-lib/actions/setup-pandoc@v2
- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true
- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: |
any::rcmdcheck
any::covr
needs: |
coverage
check
- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
error-on: '"error"'
- name: Test coverage
run: |
covr::codecov(
quiet = FALSE,
clean = FALSE,
install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package")
)
shell: Rscript {0}
- name: Show testthat output
if: always()
run: |
## --------------------------------------------------------------------
find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash
- name: Upload test results
if: failure()
uses: actions/upload-artifact@v3
with:
name: coverage-test-failures
path: ${{ runner.temp }}/package