Create release v0.3.99-rc.3.

CMakeLists.txt

@@ -17,7 +17,7 @@ cmake_minimum_required(VERSION 3.10.2)
 set(PROJECT_NAME libCellML)
 set(PROJECT_URL https://libcellml.org)
 set(_PROJECT_VERSION 0.3.99)
-set(PROJECT_DEVELOPER_VERSION -rc.2)
+set(PROJECT_DEVELOPER_VERSION -rc.3)
 project(${PROJECT_NAME} VERSION ${_PROJECT_VERSION} LANGUAGES CXX)
 
 # Set policies that affect the build.

docs/changelogs/changelog_v0.3.99-rc.2.rst

@@ -94,11 +94,6 @@ New feature
 
 * Validator check for cyclical imports by `@hsorby <https://github.com/hsorby>`_ [`#837 <https://github.com/cellml/libcellml/pull/837>`_].
 
-No category
------------
-
-* Changing version to: 0.3.99-rc.1 by `@abi-git-user <https://github.com/abi-git-user>`_ [`#1011 <https://github.com/cellml/libcellml/pull/1011>`_].
-
 Python bindings
 ---------------
 
@@ -112,10 +107,6 @@ Contributors
    :target: https://github.com/agarny
    :height: 32
    :width: 32
-.. image:: https://avatars.githubusercontent.com/u/9956702?v=4
-   :target: https://github.com/abi-git-user
-   :height: 32
-   :width: 32
 .. image:: https://avatars.githubusercontent.com/u/778048?v=4
    :target: https://github.com/hsorby
    :height: 32

docs/changelogs/changelog_v0.3.99-rc.3.rst

@@ -0,0 +1,113 @@
+libCellML latest Changelog
+==========================
+
+Bug
+---
+
+* Fix validation equivalence calculation for base units by `@hsorby <https://github.com/hsorby>`_ [`#983 <https://github.com/cellml/libcellml/pull/983>`_].
+* Create analyser test showing segfault due to unlinked Units by `@hsorby <https://github.com/hsorby>`_ [`#886 <https://github.com/cellml/libcellml/pull/886>`_].
+* Move remove all issues by `@hsorby <https://github.com/hsorby>`_ [`#892 <https://github.com/cellml/libcellml/pull/892>`_].
+* Move addIssue and removeError to private implementation of Logger class by `@hsorby <https://github.com/hsorby>`_ [`#891 <https://github.com/cellml/libcellml/pull/891>`_].
+* Move ParentedEntities removeParent out of the public API by `@hsorby <https://github.com/hsorby>`_ [`#897 <https://github.com/cellml/libcellml/pull/897>`_].
+* Add test where units are expected to be linked after parsing a model by `@hsorby <https://github.com/hsorby>`_ [`#888 <https://github.com/cellml/libcellml/pull/888>`_].
+* Report errors from importing invalid models by `@hsorby <https://github.com/hsorby>`_ [`#875 <https://github.com/cellml/libcellml/pull/875>`_].
+* Make resolve imports method more robust by `@hsorby <https://github.com/hsorby>`_ [`#873 <https://github.com/cellml/libcellml/pull/873>`_].
+* Reference corrections by `@hsorby <https://github.com/hsorby>`_ [`#848 <https://github.com/cellml/libcellml/pull/848>`_].
+
+Documentation
+-------------
+
+* Add changelogs for v0.1.0 and v0.2.0 by `@hsorby <https://github.com/hsorby>`_ [`#1009 <https://github.com/cellml/libcellml/pull/1009>`_].
+* Permits doxygen table by `@hsorby <https://github.com/hsorby>`_ [`#994 <https://github.com/cellml/libcellml/pull/994>`_].
+* Fix Doxygen warnings by `@hsorby <https://github.com/hsorby>`_ [`#890 <https://github.com/cellml/libcellml/pull/890>`_].
+* Reform documentation for all assignId methods in the Annotator by `@hsorby <https://github.com/hsorby>`_ [`#889 <https://github.com/cellml/libcellml/pull/889>`_].
+
+Generator
+---------
+
+* Generator: initialise external variables and fix our compute methods by `@agarny <https://github.com/agarny>`_ [`#961 <https://github.com/cellml/libcellml/pull/961>`_].
+* Generator: use only one variable info structure by `@agarny <https://github.com/agarny>`_ [`#950 <https://github.com/cellml/libcellml/pull/950>`_].
+* Generator profile: renamed some API methods by `@agarny <https://github.com/agarny>`_ [`#952 <https://github.com/cellml/libcellml/pull/952>`_].
+* Generator: further refinements to the generated C code by `@agarny <https://github.com/agarny>`_ [`#941 <https://github.com/cellml/libcellml/pull/941>`_].
+
+Infrastructure
+--------------
+
+* Fixes to get the CD working again by `@hsorby <https://github.com/hsorby>`_ [`#1008 <https://github.com/cellml/libcellml/pull/1008>`_].
+* CMake: support CMAKE_BUILD_TYPE by `@agarny <https://github.com/agarny>`_ [`#978 <https://github.com/cellml/libcellml/pull/978>`_].
+* CMake: allow zlib to find using ZLIB_ROOT by `@agarny <https://github.com/agarny>`_ [`#976 <https://github.com/cellml/libcellml/pull/976>`_].
+* Update emscripten documentation to catch up with the current zlib build by `@hsorby <https://github.com/hsorby>`_ [`#967 <https://github.com/cellml/libcellml/pull/967>`_].
+* Update build instructions for Windows by `@hsorby <https://github.com/hsorby>`_ [`#965 <https://github.com/cellml/libcellml/pull/965>`_].
+* Add support for `buildcache` by `@agarny <https://github.com/agarny>`_ [`#960 <https://github.com/cellml/libcellml/pull/960>`_].
+* CMake: make sure that ClangFormat is of the expected version by `@agarny <https://github.com/agarny>`_ [`#947 <https://github.com/cellml/libcellml/pull/947>`_].
+* CMake: make sure that the version of ClangFormat is properly determined by `@agarny <https://github.com/agarny>`_ [`#944 <https://github.com/cellml/libcellml/pull/944>`_].
+* CMake: mark `CLCACHE_EXE` as advanced by `@agarny <https://github.com/agarny>`_ [`#927 <https://github.com/cellml/libcellml/pull/927>`_].
+* Disable Clang-Tidy by default by `@agarny <https://github.com/agarny>`_ [`#924 <https://github.com/cellml/libcellml/pull/924>`_].
+* CMake: mark `CCACHE_EXE` as advanced by `@agarny <https://github.com/agarny>`_ [`#921 <https://github.com/cellml/libcellml/pull/921>`_].
+* Python version update by `@hsorby <https://github.com/hsorby>`_ [`#869 <https://github.com/cellml/libcellml/pull/869>`_].
+* Rework building of many linux python packages with GitHub actions by `@hsorby <https://github.com/hsorby>`_ [`#864 <https://github.com/cellml/libcellml/pull/864>`_].
+* Adding a .npmrc file to upload libcellml.js to npmjs.com by `@hsorby <https://github.com/hsorby>`_ [`#844 <https://github.com/cellml/libcellml/pull/844>`_].
+* Fixing the deploy script for cellml/libcellml by `@hsorby <https://github.com/hsorby>`_ [`#842 <https://github.com/cellml/libcellml/pull/842>`_].
+
+JavaScript bindings
+-------------------
+
+* Tidy up JS bindings tests by `@hsorby <https://github.com/hsorby>`_ [`#1005 <https://github.com/cellml/libcellml/pull/1005>`_].
+* Add JS bindings Enums tests  by `@hsorby <https://github.com/hsorby>`_ [`#1004 <https://github.com/cellml/libcellml/pull/1004>`_].
+* Add JS bindings Types tests  by `@hsorby <https://github.com/hsorby>`_ [`#1003 <https://github.com/cellml/libcellml/pull/1003>`_].
+* Add JS bindings Annotator tests by `@hsorby <https://github.com/hsorby>`_ [`#1002 <https://github.com/cellml/libcellml/pull/1002>`_].
+* Add JS bindings Analyser Model tests by `@hsorby <https://github.com/hsorby>`_ [`#1001 <https://github.com/cellml/libcellml/pull/1001>`_].
+* Add JS bindings Analyser Variable tests by `@hsorby <https://github.com/hsorby>`_ [`#1000 <https://github.com/cellml/libcellml/pull/1000>`_].
+* Add JS bindings Analyser External Variable tests by `@hsorby <https://github.com/hsorby>`_ [`#997 <https://github.com/cellml/libcellml/pull/997>`_].
+* Add JS bindings Analyser Equation Ast tests by `@hsorby <https://github.com/hsorby>`_ [`#995 <https://github.com/cellml/libcellml/pull/995>`_].
+* Add JS bindings AnalyserEquation test by `@hsorby <https://github.com/hsorby>`_ [`#992 <https://github.com/cellml/libcellml/pull/992>`_].
+* Add JS bindings Generator test by `@hsorby <https://github.com/hsorby>`_ [`#989 <https://github.com/cellml/libcellml/pull/989>`_].
+* Add JS bindings ImportSource test by `@hsorby <https://github.com/hsorby>`_ [`#988 <https://github.com/cellml/libcellml/pull/988>`_].
+* Add JS bindings Printer test by `@hsorby <https://github.com/hsorby>`_ [`#987 <https://github.com/cellml/libcellml/pull/987>`_].
+* Add JS binding tests for Variable by `@hsorby <https://github.com/hsorby>`_ [`#986 <https://github.com/cellml/libcellml/pull/986>`_].
+* Test Emscripten NamedEntity by `@hsorby <https://github.com/hsorby>`_ [`#936 <https://github.com/cellml/libcellml/pull/936>`_].
+* Test Emscripten ComponentEntity by `@hsorby <https://github.com/hsorby>`_ [`#937 <https://github.com/cellml/libcellml/pull/937>`_].
+* Test Emscripten ParentedEntity by `@hsorby <https://github.com/hsorby>`_ [`#934 <https://github.com/cellml/libcellml/pull/934>`_].
+* Test Emscripten Entity by `@hsorby <https://github.com/hsorby>`_ [`#933 <https://github.com/cellml/libcellml/pull/933>`_].
+* Implement javascript tests for Parser class by `@hsorby <https://github.com/hsorby>`_ [`#919 <https://github.com/cellml/libcellml/pull/919>`_].
+* Implement javascript tests for Component class by `@hsorby <https://github.com/hsorby>`_ [`#918 <https://github.com/cellml/libcellml/pull/918>`_].
+* Implement javascript tests for Units class by `@hsorby <https://github.com/hsorby>`_ [`#903 <https://github.com/cellml/libcellml/pull/903>`_].
+* Add javascript tests for Reset by `@hsorby <https://github.com/hsorby>`_ [`#896 <https://github.com/cellml/libcellml/pull/896>`_].
+* Update Emscripten bindings by `@hsorby <https://github.com/hsorby>`_ [`#874 <https://github.com/cellml/libcellml/pull/874>`_].
+* Update the javascript bindings to use UnitsItem and not Unit by `@hsorby <https://github.com/hsorby>`_ [`#861 <https://github.com/cellml/libcellml/pull/861>`_].
+* Allow only out of range exceptions for stoi and stod by `@hsorby <https://github.com/hsorby>`_ [`#851 <https://github.com/cellml/libcellml/pull/851>`_].
+* Units prefix improvements by `@hsorby <https://github.com/hsorby>`_ [`#846 <https://github.com/cellml/libcellml/pull/846>`_].
+
+Modified feature
+----------------
+
+* XmlDoc: compress the XHTML+MathML+SVG DTD only once by `@agarny <https://github.com/agarny>`_ [`#979 <https://github.com/cellml/libcellml/pull/979>`_].
+* Generator: refine the generated code for algebraic models by `@agarny <https://github.com/agarny>`_ [`#901 <https://github.com/cellml/libcellml/pull/901>`_].
+* Rename unsetOrder to removeOrder by `@hsorby <https://github.com/hsorby>`_ [`#898 <https://github.com/cellml/libcellml/pull/898>`_].
+* Privatise set parent by `@hsorby <https://github.com/hsorby>`_ [`#876 <https://github.com/cellml/libcellml/pull/876>`_].
+* Add assignId API for AnyCellmlElement by `@hsorby <https://github.com/hsorby>`_ [`#880 <https://github.com/cellml/libcellml/pull/880>`_].
+* Annotator: replace std::pair with AnyCellmlElement by `@agarny <https://github.com/agarny>`_ [`#836 <https://github.com/cellml/libcellml/pull/836>`_].
+* Rename Unit class to UnitsItem class by `@hsorby <https://github.com/hsorby>`_ [`#853 <https://github.com/cellml/libcellml/pull/853>`_].
+
+New feature
+-----------
+
+* Validator check for cyclical imports by `@hsorby <https://github.com/hsorby>`_ [`#837 <https://github.com/cellml/libcellml/pull/837>`_].
+
+Python bindings
+---------------
+
+* Expose cellmlElementTypeAsString in the Python bindings by `@hsorby <https://github.com/hsorby>`_ [`#985 <https://github.com/cellml/libcellml/pull/985>`_].
+* Remove InstallCommand from setup.in.py by `@hsorby <https://github.com/hsorby>`_ [`#885 <https://github.com/cellml/libcellml/pull/885>`_].
+
+Contributors
+------------
+
+.. image:: https://avatars.githubusercontent.com/u/778048?v=4
+   :target: https://github.com/hsorby
+   :height: 32
+   :width: 32
+.. image:: https://avatars.githubusercontent.com/u/602265?v=4
+   :target: https://github.com/agarny
+   :height: 32
+   :width: 32

docs/index.rst

@@ -34,6 +34,7 @@ Changelogs
 .. toctree::
    :glob:
 
+   changelogs/changelog_v0.3.99-rc.2
    changelogs/changelog_v0.2.0
    changelogs/changelog_v0.1.0