Function cells #909
Workflow file for this run
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| name: Test | |
| on: | |
| workflow_dispatch: | |
| push: | |
| branches: [ main ] | |
| pull_request: | |
| jobs: | |
| test: | |
| name: ${{ matrix.build }} / ${{ matrix.os }} / ${{ matrix.mode }} | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| build: | |
| - clasp | |
| - cando | |
| os: | |
| - macos-latest | |
| - ubuntu-22.04 | |
| mode: | |
| - bytecode | |
| - faso | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - name: Install Ubuntu dependencies | |
| if: matrix.os == 'ubuntu-22.04' | |
| run: | | |
| sudo apt-get update | |
| sudo apt install -y binutils-gold clang-15 libclang-15-dev libclang-cpp15-dev llvm-15 llvm-15-dev libelf-dev libgmp-dev libunwind-dev ninja-build sbcl libnetcdf-dev libexpat1-dev libfmt-dev libboost-all-dev | |
| - name: Install MacOS dependencies | |
| if: matrix.os == 'macos-latest' | |
| run: | | |
| brew update | |
| brew upgrade | |
| brew install boost fmt gmp llvm@15 ninja pkg-config sbcl ecl netcdf expat | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| - uses: conda-incubator/[email protected] | |
| if: matrix.build == 'cando' | |
| - name: Install AmberTools | |
| if: matrix.build == 'cando' | |
| run: | | |
| conda install -c conda-forge ambertools | |
| - name: Clasp koga @ Ubuntu | |
| if: ${{ matrix.os == 'ubuntu-22.04' && matrix.build == 'clasp' }} | |
| run: | | |
| ./koga --build-mode=${{ matrix.mode }} | |
| - name: Cando koga @ Ubuntu | |
| if: ${{ matrix.os == 'ubuntu-22.04' && matrix.build == 'cando' }} | |
| run: | | |
| ./koga --build-mode=${{ matrix.mode }} --extensions=cando,seqan-clasp | |
| - name: Clasp koga @ MacOS | |
| if: ${{ matrix.os == 'macos-latest' && matrix.build == 'clasp' }} | |
| run: | | |
| ./koga --build-mode=${{ matrix.mode }} --llvm-config=/usr/local/opt/llvm@15/bin/llvm-config | |
| - name: Cando koga @ MacOS | |
| if: ${{ matrix.os == 'macos-latest' && matrix.build == 'cando' }} | |
| run: | | |
| ./koga --build-mode=${{ matrix.mode }} --extensions=cando,seqan-clasp --llvm-config=/usr/local/opt/llvm@15/bin/llvm-config | |
| - name: Build | |
| run: | | |
| ninja -C build | |
| - name: Run regression tests | |
| run: | | |
| ninja -C build test | |
| - name: Run ANSI tests | |
| if: ${{ matrix.build == 'clasp' }} | |
| run: | | |
| ninja -C build ansi-test | |
| - name: Run ASDF tests | |
| if: ${{ matrix.build == 'clasp' }} | |
| run: | | |
| ninja -C build asdf-test | |
| - name: Run Cando regression tests | |
| if: ${{ matrix.build == 'cando' }} | |
| run: | | |
| ninja -C build cando-test |