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config.scheme.yaml
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config.scheme.yaml
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---
sera_inbox_folder_path:
description: Location for sera inbox folders
type: string
required: true
sera_outbox_folder_path:
description: Location for sera outbox folders
type: string
required: true
wp1_notification_mail_bioinfo:
description: email used to notify bioinfo
type: string
required: true
tm_workarea_folder_path:
description: Location for Twist Myeloid workarea folders
type: string
required: true
default: "stanley"
tm_outbox_folder_path:
description: Location for Twist Myeloid outbox folders
type: string
required: true
default: stanley
TSO500_inbox_folder_path:
description: Location for TSO500 inbox folders
type: string
required: true
default: "stanley"
TSO500_outbox_folder_path:
description: Location for TSO500 outbox folders
type: string
required: true
default: "stanley"
TSO500_inbox_days_to_remove_runfolder:
description: How many days TSO500 runfolders should be kept in inbox
type: number
required: true
default: 10000
TSO500_outbox_days_to_remove_runfolder:
description: How many days TSO500 results should be kept in outbox
type: number
required: true
default: 10000
tc_workarea_folder_path:
description: Location for Twist Cancer workarea folders
type: string
required: true
default: "stanley"
tc_outbox_folder_path:
description: Location for Twist Cancer outbox folders
type: string
required: true
default: stanley
tc_days_to_remove_runfolder:
description: How many days WP3 TC results should be kept in outbox
type: number
required: true
default: 10000 #30
wp3_notification_mail_bioinfo:
description: Email to notfy bioinfo
type: string
required: true
te_inbox_folder_path:
description: Location of WP3 TE INBOX folders
type: string
required: true
te_outbox_folder_path:
description: Location of WP3 TE OUTBOX find_folders
type: string
required: true
te_days_to_remove_inbox:
description: How many days the inbox runfolders should be kept
type: number
required: true
default: 1000 #30
te_days_to_remove_outbox:
description: How many days the folders in outbox should be kept
type: number
required: true
default: 1000 #60