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utilities

useful scripts for computational chemistry

Most scripts will probably require cctk and a working Python 3.7+ installation.

Contents:

generate_ion_pairs.py

Given two input molecules, randomly arranges them in relation to each other. Allows for unbiased generation of different conformations of loosely-bound outer-sphere complexes (e.g. ion pairs).

generate_conformations.py

Given an input structure, uses crest to generate new conformations and outputs Gaussian input files.

parse_conformations.py

Given a list of output files, automatically sorts them by energy, removes duplicate conformations, and prints the low-energy conformations to new input files.

Corin Wagen

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utilities for computational chemistry

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