Development

Installation

Requirements

• Python 2.7 or 3.5/3.6
• Git

Pip

1. Fork the cytominer-database repository
2. Install the project and its dependencies:

   git clone [email protected]:USERNAME/cytominer-database.git
   cd cytominer-database
   pip install --upgrade -r requirements.txt
   

Tests

Pip

See this https://github.com/pytest-dev/pytest/issues/4608 in case of errors

1. Run the tests:

   pytest
   

   or an individual test, e.g.:

   pytest tests/test_ingest.py
   

   or an individual module, e.g.:

   pytest tests/test_ingest.py::test_seed
   

   or an individual fixture within a module, e.g.:

   pytest tests/test_ingest.py::test_seed[htqc]