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Update install instructions
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zenalapp committed Sep 6, 2023
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Expand Up @@ -27,18 +27,18 @@ bistro uses the log10LRs to identify bloodmeal-human matches using a per-bloodme

## Installing the `bistro` R package

To install `bistro`, first make sure you have the following installed:

- Windows: [Rtools](https://cran.r-project.org/bin/windows/Rtools/)
- Mac: Xcode from the Mac App store

Then, run the following commands:
To install `bistro`, run the following commands:

```{r, eval = FALSE}
install.packages("remotes") # install remotes if needed
remotes::install_github("duke-malaria-collaboratory/bistro")
```

If you run into errors, try the following:

- Windows: install [Rtools](https://cran.r-project.org/bin/windows/Rtools/)
- Mac: install Xcode from the Mac App store

## Getting started with `bistro`

The most important function in `bistro` is `bistro()`. This document will take you through all of the required and optional inputs, as well as the output.
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