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Bugfix: simulation_type_knockdown with multiple genes #48

Bugfix: simulation_type_knockdown with multiple genes

Bugfix: simulation_type_knockdown with multiple genes #48

Triggered via pull request February 21, 2024 10:44
Status Failure
Total duration 1h 0m 29s
Artifacts 3

R-CMD-check.yml

on: pull_request
Matrix: R-CMD-check
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12 errors and 65 warnings
ubuntu-latest (devel)
Failed to get R devel: Failed to get R devel: Failed to install R: Error: The process '/usr/bin/sudo' failed with exit code 100
ubuntu-latest (release)
Failed to get R 4.3.2: Failed to get R 4.3.2: Failed to install R: Error: The process '/usr/bin/sudo' failed with exit code 100
ubuntu-latest (oldrel-1)
Failed to get R 4.2.3: Failed to get R 4.2.3: Failed to install R: Error: The process '/usr/bin/sudo' failed with exit code 100
windows-latest (release)
R CMD check found ERRORs
windows-latest (release)
Process completed with exit code 1.
windows-latest (oldrel)
R CMD check found ERRORs
windows-latest (oldrel)
Process completed with exit code 1.
windows-latest (devel)
R CMD check found ERRORs
windows-latest (devel)
Process completed with exit code 1.
macOS-latest (oldrel)
Process completed with exit code 1.
macOS-latest (release)
Failed to get R 4.3.2: Failed to get R 4.3.2: Failed to download version 4.3.2: Error: Unexpected HTTP response: 404
macOS-latest (devel)
Process completed with exit code 1.
ubuntu-latest (devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
r-lib/actions/setup-pandoc@v1 is deprecated.
r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.
ubuntu-latest (devel)
No files were found with the provided path: check. No artifacts will be uploaded.
r-lib/actions/setup-r@v1 is deprecated.
r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.
ubuntu-latest (release)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (release)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
ubuntu-latest (release)
No files were found with the provided path: check. No artifacts will be uploaded.
r-lib/actions/setup-r@v1 is deprecated.
r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.
r-lib/actions/setup-pandoc@v1 is deprecated.
r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.
ubuntu-latest (oldrel-1)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
ubuntu-latest (oldrel-1)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
r-lib/actions/setup-r@v1 is deprecated.
r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.
ubuntu-latest (oldrel-1)
No files were found with the provided path: check. No artifacts will be uploaded.
r-lib/actions/setup-pandoc@v1 is deprecated.
r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.
r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
windows-latest (release)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
windows-latest (release)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
r-lib/actions/check-r-package@v1 is deprecated.
r-lib/actions/check-r-package@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
windows-latest (release)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (release)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
r-lib/actions/setup-pandoc@v1 is deprecated.
r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.
r-lib/actions/setup-r@v1 is deprecated.
r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.
windows-latest (release)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
windows-latest (oldrel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
windows-latest (oldrel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
r-lib/actions/check-r-package@v1 is deprecated.
r-lib/actions/check-r-package@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
windows-latest (oldrel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (oldrel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
r-lib/actions/setup-pandoc@v1 is deprecated.
r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.
r-lib/actions/setup-r@v1 is deprecated.
r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.
windows-latest (oldrel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
windows-latest (devel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
windows-latest (devel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
r-lib/actions/check-r-package@v1 is deprecated.
r-lib/actions/check-r-package@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
windows-latest (devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
r-lib/actions/setup-r@v1 is deprecated.
r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.
windows-latest (devel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
r-lib/actions/setup-pandoc@v1 is deprecated.
r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.
r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
macOS-latest (oldrel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
macOS-latest (oldrel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
macOS-latest (oldrel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (oldrel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
r-lib/actions/setup-pandoc@v1 is deprecated.
r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.
r-lib/actions/setup-r@v1 is deprecated.
r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.
macOS-latest (oldrel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
macOS-latest (oldrel)
No files were found with the provided path: check. No artifacts will be uploaded.
macOS-latest (release)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (release)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
r-lib/actions/setup-pandoc@v1 is deprecated.
r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.
macOS-latest (release)
No files were found with the provided path: check. No artifacts will be uploaded.
r-lib/actions/setup-r@v1 is deprecated.
r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.
r-lib/actions/setup-r-dependencies@v1 is deprecated.
r-lib/actions/setup-r-dependencies@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because 'v2' workflows are much simpler than 'v1' workflows.
macOS-latest (devel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
macOS-latest (devel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
macOS-latest (devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, r-lib/actions/setup-pandoc@v1, r-lib/actions/setup-r@v1, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
macOS-latest (devel)
No files were found with the provided path: check. No artifacts will be uploaded.
r-lib/actions/setup-r@v1 is deprecated.
r-lib/actions/setup-r@v1 is deprecated. Please update your workflow to use the 'v2' version. Also look at the examples at https://github.com/r-lib/actions/tree/v2/examples because '@v2' workflows are much simpler than 'v1' workflows.
macOS-latest (devel)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
r-lib/actions/setup-pandoc@v1 is deprecated.
r-lib/actions/setup-pandoc@v1 is deprecated. Please update your workflow to use the 'v2' version.

Artifacts

Produced during runtime
Name Size
Windows-rdevel-results Expired
9.6 MB
Windows-roldrel-results Expired
9.6 MB
Windows-rrelease-results Expired
9.6 MB