Finishing adding NCBIfam-AMR #151
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| name: Build | |
| on: [push] | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v3 | |
| - name: Set up JDK 11 | |
| uses: actions/setup-java@v3 | |
| with: | |
| java-version: '11' | |
| distribution: 'temurin' | |
| cache: maven | |
| - name: Build | |
| run: mvn -B package --file core/pom.xml | |
| - name: Install PCRE2 | |
| run: sudo apt-get install -y libpcre2-8-0 | |
| - name: Run | |
| run: | | |
| cd core/jms-implementation/target/interproscan-5-dist/ | |
| bash interproscan.sh -i test_all_appl.fasta -dp |