The repository is divided into three parts:
-Fortran source code of the software used to simulate data based on real genotypes, developped by Didier Boichard (INRAE). An example of parameters and description of their use are also provided.
-The modified version of BayesR (available here: https://github.com/syntheke/bayesR), including recovery of the estimated per-SNP effects for each iteration, which in turn facilitates the estimation of per-SNP posterior variances. An example of the use of this software is also provided.
-Partial R scripts used to analyze the BayesR model output and visualize the corresponding results. Scripts to reproduce all figures presented in the article are also included.