Import spectra from Fritz #2
Workflow file for this run
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| name: Test | |
| on: | |
| push: | |
| pull_request: | |
| jobs: | |
| test: | |
| # The type of runner that the job will run on | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 30 | |
| # Steps represent a sequence of tasks that will be executed as part of the job | |
| steps: | |
| # Checks-out your repository under $GITHUB_WORKSPACE, so your job can access it | |
| - uses: actions/checkout@v2 | |
| - uses: actions/setup-python@v2 | |
| with: | |
| python-version: "3.10" | |
| - name: Fetch and set up Kowalski | |
| uses: actions/checkout@v2 | |
| with: | |
| repository: skyportal/kowalski | |
| path: kowalski | |
| - name: Configure and spin up Kowalski, ingest test data | |
| run: | | |
| cd kowalski | |
| python -m pip install --upgrade pip | |
| sed -i'' -e 's/4000/6000/g' config.defaults.yaml | |
| sed -i'' -e 's/4000/6000/g' docker-compose.defaults.yaml | |
| cp docker-compose.defaults.yaml docker-compose.yaml | |
| make docker_build && make docker_up | |
| make docker_test | |
| - name: Debug Check that Kowalski is up | |
| run: | | |
| curl -X GET http://localhost:6000 | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install "wheel>=0.36.0" | |
| - uses: actions/cache@v2 | |
| with: | |
| path: | | |
| ~/.cache/pip | |
| key: ${{ runner.os }}-${{ hashFiles('**/requirements*.txt') }} | |
| - name: create secrets.json | |
| run: | | |
| touch secrets.json | |
| cat >> secrets.json << EOL | |
| { | |
| "server" : { | |
| "admin_username": "admin", | |
| "admin_password": "admin" | |
| }, | |
| "database": { | |
| "admin": "mongoadmin", | |
| "admin_pwd": "mongoadminsecret", | |
| "user": "user", | |
| "pwd": "pwd" | |
| }, | |
| "kowalski": { | |
| "instances": { | |
| "kowalski": { | |
| "protocol": "http", | |
| "host": "172.17.0.1", | |
| "port": 6000, | |
| "username": "admin", | |
| "password": "admin" | |
| } | |
| } | |
| } | |
| } | |
| EOL | |
| - name: Less workers for testing | |
| run: | | |
| sed -i'' -e 's/-w 8/-w 2/g' Dockerfile | |
| - name: Add volumes | |
| run: | | |
| docker volume create ztf_variable_marshal_mongodb | |
| docker volume create ztf_variable_marshal_data | |
| - name: Start mongo | |
| run: | | |
| docker run -d --restart always --name ztf_variable_marshal_mongo_1 -p 27025:27017 --expose 27025 \ | |
| -v ztf_variable_marshal_mongodb:/data/db \ | |
| -e MONGO_INITDB_ROOT_USERNAME=mongoadmin -e MONGO_INITDB_ROOT_PASSWORD=mongoadminsecret \ | |
| mongo:latest | |
| - name: Build the marshal | |
| run: | | |
| docker build --rm -t ztf_variable_marshal:latest -f Dockerfile . | |
| - name: Start the marshal | |
| run: | | |
| docker run --name ztf_variable_marshal -d --restart always -p 8000:4000 -v ztf_variable_marshal_data:/data --link ztf_variable_marshal_mongo_1:mongo ztf_variable_marshal:latest | |
| - name: Wait for marshal to start | |
| run: | | |
| sleep 15 | |
| - name: Docker Logs | |
| run: | | |
| docker logs ztf_variable_marshal | |
| - name: Run tests | |
| run: | | |
| sleep 10 | |
| pip install requests pymongo pytest | |
| python -m pytest test.py |