Skip to content

Commit

Permalink
draft solution to ga4gh/gks-metaschema#35
Browse files Browse the repository at this point in the history
  • Loading branch information
ahwagner committed Nov 10, 2024
1 parent c8d15c9 commit 89d4e5c
Showing 1 changed file with 6 additions and 12 deletions.
18 changes: 6 additions & 12 deletions schema/va-spec/acmg-2015/def/VariantPathogenicityStatement.rst
Original file line number Diff line number Diff line change
Expand Up @@ -6,17 +6,11 @@

A Statement describing the role of a variant in causing an inherited condition.

**Information Model**
**Profile Conditions**

This class adds the following conditions to the :ref:`variant-pathogenicity-statement-profile`:

.. list-table::
:class: clean-wrap
:header-rows: 1
:align: left
:widths: auto

* - Field
- Flags
- Type
- Limits
- Description
- `VariantPathogenicityStatement.classification` is additionally defined as
*The ACMG 2015 classification of the variant's pathogenicity*.
- `.classification.label` is constrained to values `pathogenic`, `likely pathogenic`,
`uncertain significance`, `likely benign`, and `benign`.

1 comment on commit 89d4e5c

@ahwagner
Copy link
Member Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

@larrybabb for your review. Please let me know if this addresses what you were thinking with respect to ga4gh/gks-metaschema#35, or if you were looking for something different.

Please sign in to comment.