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Add deeparg#6646

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hugolefeuvre wants to merge 22 commits intogalaxyproject:maingalaxyproject/tools-iuc:mainfrom hugolefeuvre:deeparghugolefeuvre/tools-iuc:deepargCopy head branch name to clipboard

+14,027

Commits

Commits on Oct 7, 2024

• initiate deeparg wrapping

  hugolefeuvre

  committed
  b4963fb

• initiate deeparg predict

  hugolefeuvre

  committed
  97fac0c

Commits on Oct 8, 2024

• V1 of deeparg predict wrapping

  hugolefeuvre

  committed
  642476f

• Start deeparg short reads pipeline wrapping

  hugolefeuvre

  committed
  046c1cc

Commits on Oct 9, 2024

• yield requirements for short read pipeline

  hugolefeuvre

  committed
  7a6cbca

• delete conda list in command

  hugolefeuvre

  committed
  3744c47

• Fix requirements

  bebatut

  committed
  9253f50

• initiate deeparg data_manager

  hugolefeuvre

  committed
  42bb122

Commits on Oct 10, 2024

• DM modification and addition

  hugolefeuvre

  committed
  d3c4e9c

• Temporary gunzip test files because failed with .gz

  hugolefeuvre

  committed
  00fc4b3

• Short reads pipeline output, not sure to keep them

  hugolefeuvre

  committed
  1dc7046

• one more file

  hugolefeuvre

  committed
  399c1aa

Commits on Oct 11, 2024

• delete results files don't used

  hugolefeuvre

  committed
  1181c77

• modification about input extension

  hugolefeuvre

  committed
  b7724b7

Commits on Oct 15, 2024

• Merge branch 'galaxyproject:main' into deeparg

  hugolefeuvre

  authored
  15d9c99

Commits on Oct 30, 2024

• Merge branch 'galaxyproject:main' into deeparg

  hugolefeuvre

  authored
  17342e1

Commits on Oct 31, 2024

• modify test model option : from LS to SS

  hugolefeuvre

  committed
  5a6cb2a

Commits on Dec 19, 2024

• download deeparg db in xml because its too big and cant reduce it, only for test, modify loc file

  hugolefeuvre

  committed
  1578ae5

• modify DM, delete dbkey column

  hugolefeuvre

  committed
  0f1efe3

• Merge branch 'galaxyproject:main' into deeparg

  hugolefeuvre

  authored
  20a8a2a

• size files less then 1Mo

  hugolefeuvre

  committed
  c72a087

Commits on Dec 20, 2024

• modify requirements

  hugolefeuvre

  committed
  a33ee96