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Fix rank SVs with multiple families (#480) #1435

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Fix rank SVs with multiple families (#480)

Fix rank SVs with multiple families (#480) #1435

Triggered via push November 5, 2024 15:43
@fellen31fellen31
pushed c47f69a
dev
Status Failure
Total duration 1m 55s
Artifacts –

ci.yml

on: push
Matrix: test
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20 errors and 20 warnings
ANNOTATE_SVS | docker | NF-24.04.2
Process completed with exit code 1.
CALL_REPEAT_EXPANSIONS | docker | NF-24.04.2
Process completed with exit code 1.
CALL_SVS | docker | NF-24.04.2
Process completed with exit code 1.
METHYLATION | docker | NF-24.04.2
Process completed with exit code 1.
samplesheet | docker | NF-24.04.2
Process completed with exit code 1.
samplesheet_multisample_bam | docker | NF-24.04.2
Process completed with exit code 1.
samplesheet_multisample_ont_bam | docker | NF-24.04.2
Process completed with exit code 1.
RANK_VARIANTS | docker | NF-24.04.2
Process completed with exit code 1.
SHORT_VARIANT_CALLING | docker | NF-24.04.2
Process completed with exit code 1.
SNV_ANNOTATION | docker | NF-24.04.2
Process completed with exit code 1.
CALL_REPEAT_EXPANSIONS | docker | NF-latest-everything
Process completed with exit code 1.
CALL_SVS | docker | NF-latest-everything
Process completed with exit code 1.
RANK_VARIANTS | docker | NF-latest-everything
Process completed with exit code 1.
ANNOTATE_SVS | docker | NF-latest-everything
Process completed with exit code 1.
samplesheet | docker | NF-latest-everything
Process completed with exit code 1.
samplesheet_multisample_bam | docker | NF-latest-everything
Process completed with exit code 1.
SHORT_VARIANT_CALLING | docker | NF-latest-everything
Process completed with exit code 1.
samplesheet_multisample_ont_bam | docker | NF-latest-everything
Process completed with exit code 1.
METHYLATION | docker | NF-latest-everything
Process completed with exit code 1.
SNV_ANNOTATION | docker | NF-latest-everything
Process completed with exit code 1.
ANNOTATE_SVS | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
CALL_REPEAT_EXPANSIONS | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
CALL_SVS | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
METHYLATION | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet_multisample_bam | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet_multisample_ont_bam | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
RANK_VARIANTS | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
SHORT_VARIANT_CALLING | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
SNV_ANNOTATION | docker | NF-24.04.2
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
CALL_REPEAT_EXPANSIONS | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
CALL_SVS | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
RANK_VARIANTS | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
ANNOTATE_SVS | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet_multisample_bam | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
SHORT_VARIANT_CALLING | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
samplesheet_multisample_ont_bam | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
METHYLATION | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
SNV_ANNOTATION | docker | NF-latest-everything
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/setup-python@v4. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/