Skip to content

Commit

Permalink
Update docs (#506)
Browse files Browse the repository at this point in the history
* update docs

* prettier

* update params

* prettier

* parameters

* changelog
  • Loading branch information
fellen31 authored Nov 19, 2024
1 parent e9ff17c commit a36ad22
Show file tree
Hide file tree
Showing 6 changed files with 178 additions and 220 deletions.
1 change: 1 addition & 0 deletions CHANGELOG.md
Original file line number Diff line number Diff line change
Expand Up @@ -94,6 +94,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
- [#502](https://github.com/genomic-medicine-sweden/nallo/pull/502) - Changed to annotating and ranking SNVs per family instead of per project
- [#502](https://github.com/genomic-medicine-sweden/nallo/pull/502) - Changed output documentation and structure to match `sample` and `family` for all variants
- [#502](https://github.com/genomic-medicine-sweden/nallo/pull/502) - Changed the way of validating the samplesheet to remove outputing false errors with `ifEmpty`
- [#506](https://github.com/genomic-medicine-sweden/nallo/pull/506) - Updated documentation

### `Removed`

Expand Down
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -52,7 +52,7 @@

##### Filtering

- Filter SNVs, INDELs, SVs and CNVs with [filter_vep](https://www.ensembl.org/vep) and [bcftools view](https://samtools.github.io/bcftools/bcftools.html).
- Filter SNVs, INDELs, SVs and CNVs with [filter_vep](https://www.ensembl.org/vep) and [bcftools](https://samtools.github.io/bcftools/bcftools.html)

## Usage

Expand Down
2 changes: 1 addition & 1 deletion docs/index.md
Original file line number Diff line number Diff line change
Expand Up @@ -48,7 +48,7 @@ description: A bioinformatics analysis pipeline for long-reads from both PacBio

### Filtering

- Filter SNVs, INDELs, SVs and CNVs with [filter_vep](https://www.ensembl.org/vep) and [bcftools view](https://samtools.github.io/bcftools/bcftools.html).
- Filter SNVs, INDELs, SVs and CNVs with [filter_vep](https://www.ensembl.org/vep) and [bcftools](https://samtools.github.io/bcftools/bcftools.html)

## Usage

Expand Down
Loading

0 comments on commit a36ad22

Please sign in to comment.