Trgt 1.2.0 #505
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Trgt 1.2.0 #505
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Closes #298. Removed local TRGT module and replaced it with trgt/genotype from nf-core.
Also replaced call to bcftools/merge with trgt/merge because bcftools drops most of the REF allele.
PR checklist
nf-core pipelines lint).nextflow run . -profile test,docker --outdir <OUTDIR>).nextflow run . -profile debug,test,docker --outdir <OUTDIR>).docs/usage.mdis updated.docs/output.mdis updated.CHANGELOG.mdis updated.README.mdis updated (including new tool citations and authors/contributors).