Merge branch 'main' into docs-for-extrapolate-eh

.github/dependabot.yml

@@ -0,0 +1,21 @@
+version: 2
+updates:
+  - package-ecosystem: github-actions
+    directory: "/"
+    schedule:
+      interval: monthly
+  - package-ecosystem: pip
+    directory: "/.github/workflows"
+    schedule:
+      interval: monthly
+  - package-ecosystem: pip
+    directory: "/docs"
+    schedule:
+      interval: monthly
+  - package-ecosystem: pip
+    directory: "/"
+    schedule:
+      interval: monthly
+    versioning-strategy: lockfile-only
+    allow:
+      - dependency-type: "all"

.github/release-drafter.yml

@@ -0,0 +1,77 @@
+# See https://github.com/marketplace/actions/release-drafter for configuration
+categories:
+  - title: ":boom: Breaking Changes"
+    labels:
+      - "API breaking"
+  - title: ":rocket: Features"
+    labels:
+      - "type: feature: ui"
+      - "type: feature: physical"
+  - title: ":fire: Removals and Deprecations"
+    labels:
+      - "type: maint: removal"
+  - title: ":beetle: Fixes"
+    labels:
+      - "type: bug"
+  - title: ":racehorse: Performance"
+    labels:
+      - "type: performance: memory"
+      - "type: performance: cpu"
+      - "type: accuracy"
+  - title: ":rotating_light: Testing"
+    labels:
+      - "type: testing"
+  - title: ":construction_worker: Continuous Integration"
+    labels:
+      - "type: ci"
+  - title: ":books: Documentation"
+    labels:
+      - "type: maint: documentation"
+  - title: ":hammer: Refactoring"
+    labels:
+      - "type: maint: refactoring"
+  - title: ":lipstick: Style"
+    labels:
+      - "type: maint: style"
+  - title: ":package: Dependencies"
+    labels:
+      - "type: maint: dependencies"
+      - "type: maint: build"
+
+name-template: 'v$RESOLVED_VERSION'
+tag-template: 'v$RESOLVED_VERSION'
+
+autolabeler:
+  - label: 'type: maint: documentation'
+    files:
+      - '*.md'
+      - '*.rst'
+      - 'docs/**/*'
+    branch:
+      - '/.*docs{0,1}.*/'
+  - label: 'type: bug'
+    branch:
+      - '/fix.*/'
+    title:
+      - '/fix/i'
+  - label: "type: maint: removal"
+    title:
+      - "/remove .*/i"
+  - label: "type: ci"
+    files:
+      - '.github/*'
+      - '.pre-commit-config.yaml'
+      - '.coveragrc'
+    branch:
+      - '/pre-commit-ci-update-config/'
+  - label: "type: maint: style"
+    files:
+      - '/pre-commit-ci-update-config/'
+  - label: "type: maint: refactoring"
+    title:
+      - "/.* refactor.*/i"
+
+template: |
+  ## Changes
+
+  $CHANGES

.github/workflows/auto-merge-deps.yml

@@ -0,0 +1,14 @@
+name: auto-merge
+
+on:
+  pull_request:
+
+jobs:
+  auto-merge:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: ahmadnassri/action-dependabot-auto-merge@v2
+        with:
+          target: minor
+          github-token: ${{ secrets.AUTO_MERGE }}

.github/workflows/check-build.yml

@@ -0,0 +1,27 @@
+name: Check Distribution Build
+
+on: push
+
+jobs:
+  check-build:
+    name: Twine Check
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@master
+        with:
+          fetch-depth: 0
+
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.10"
+
+      - name: Install Build Tools
+        run: pip install build twine
+
+      - name: Build a binary wheel
+        run: |
+          python -m build .
+
+      - name: Check Distribution
+        run: |
+          twine check dist/*

.github/workflows/labeler.yml

@@ -0,0 +1,19 @@
+name: Labeler
+
+on: push
+
+jobs:
+  labeler:
+    runs-on: ubuntu-latest
+    permissions:
+      issues: write
+      content: read
+
+    steps:
+      - name: Check out the repository
+        uses: actions/checkout@v4
+
+      - name: Run Labeler
+        uses: crazy-max/[email protected]
+        with:
+          github-token: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/publish-to-pypi.yaml

@@ -1,42 +1,30 @@
-name: Deploy to PyPI
+name: Publish Python distributions to PyPI
 
-on: push
+on:
+  release:
+    types: [published]
 
 jobs:
   build-n-publish:
-    name: Deploy
-    runs-on: ubuntu-22.04
+    name: Make Release on PyPI and Github
+    runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@master
-      # https://github.com/ansible/pylibssh/blob/1e7b17f/.github/workflows/build-test-n-publish.yml#L146-L151
-      - name: Get history and tags for SCM versioning to work
-        run: |
-          git fetch --prune --unshallow
-          git fetch --depth=1 origin +refs/tags/*:refs/tags/*
-          git describe --tags
-          git describe --tags $(git rev-list --tags --max-count=1)
-      - name: Set up Python 3.10
-        uses: actions/setup-python@v4
         with:
-          python-version: "3.10"
-      - name: Install pep517
-        run: |
-          python -m pip install pep517 --user
-          python -m pip install setuptools_scm
-          python setup.py --version
-      - name: Create setuptools_scm env variable
-        if: startsWith(github.ref, 'refs/tags/') != true
-        shell: bash
+          fetch-depth: 0
+
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.12"
+
+      - name: Install Build Tools
+        run: pip install build
+
+      - name: Build a binary wheel
         run: |
-          wget https://gist.github.com/plaplant/0902f09e59166bac742bbd554f3cd2f9/raw/make_dev_version.sh -O ../make_dev_version.sh
-          version=$(bash ../make_dev_version.sh)
-          echo "SETUPTOOLS_SCM_PRETEND_VERSION=$version" >> $GITHUB_ENV
-      - name: Build a binary wheel and a source tarball
-        run: python -m pep517.build --binary --source --out-dir dist .
-      # deploy to actual PyPI only when a tag is pushed (which should happen only
-      # automatically on master)
-      - name: Publish distribution 📦 to PyPI
-        if: startsWith(github.ref, 'refs/tags')
-        uses: pypa/gh-action-pypi-publish@release/v1
+          python -m build .
+
+      - name: Publish to PyPI
+        uses: pypa/gh-action-pypi-publish@master
         with:
           password: ${{ secrets.pypi_password }}

.github/workflows/release-draft.yml

@@ -0,0 +1,21 @@
+name: Update Draft Release
+
+on: push
+
+jobs:
+  draft-release:
+    name: Update Draft Release
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@master
+        with:
+          fetch-depth: 0
+
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.10"
+
+      - name: Publish the release notes
+        uses: release-drafter/[email protected]
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/test_suite.yaml

@@ -5,12 +5,9 @@ name: Tests
 # Also, only test on pull requests into master/dev.
 on:
   push:
-    tags-ignore:
-      - 'v*'
   pull_request:
     branches:
-      - 'master'
-      - 'dev'
+      - 'main'
 
 jobs:
   tests:
@@ -26,12 +23,12 @@ jobs:
       fail-fast: false
       matrix:
         os: [ubuntu-latest, macos-latest]
-        python-version: [3.8, 3.9, "3.10", "3.11"]
+        python-version: [3.9, "3.10", "3.11", "3.12"]
     steps:
       - uses: actions/checkout@master
         with:
           fetch-depth: 1
-      - uses: actions/setup-python@v4
+      - uses: actions/setup-python@v5
         with:
           python-version: ${{ matrix.python-version }}
       - uses: fortran-lang/setup-fortran@v1
@@ -44,7 +41,7 @@ jobs:
       - name: Run Tests
         run: |
           python -m pytest --cov=hmf --cov-config=.coveragerc --cov-report xml:./coverage.xml --durations=25
-      - uses: codecov/codecov-action@v3
+      - uses: codecov/codecov-action@v4
         if: matrix.os == 'ubuntu-latest' && success() && !contains(github.event.pull_request.labels.*.name, 'auto-pr')
         with:
           file: ./coverage.xml # optional