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Merge pull request #256 from neuromechanist/slam_add_sample_terms
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Add exemplar tags
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@VisLab
VisLab authored Aug 2, 2024
2 parents 2cb2888 + c67d165 commit ab2496f
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11 changes: 11 additions & 0 deletions library_schemas/slam/prerelease/HED_slam_1.0.0.mediawiki
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Expand Up @@ -6,6 +6,17 @@ The HED SLAM(Sensor Location and Motion) HED library schema is designed to stand
!# start schema

'''Anatomical-landmark''' <nowiki>{rooted=Anatomical-item} [A collection of specific points on the human body used for anatomical and sensor placement reference.]</nowiki>
* Head-landmark <nowiki>[Points on the head used as reference landmarks.]</nowiki>
** Inion <nowiki>[The most prominent point of the occipital bone at the back of the head.]</nowiki>
** Left-helix-tragus-junction-LHJ <nowiki>[The point where the helix meets the tragus of the left ear.]</nowiki>
** Mastoid-process
** Nasion <nowiki>[The midpoint between the eyes just above the bridge of the nose.]</nowiki>
** Right-helix-tragus-junction-RHJ <nowiki>[The point where the helix meets the tragus of the right ear.]</nowiki>
** Vertex <nowiki>[The highest point on the head in the midline.]</nowiki>
* Torso-chest-landmark <nowiki>[Points on the chest used as reference landmarks.]</nowiki>
** Acromion-process <nowiki>[The outermost point of the shoulder blade.]</nowiki>
** Vertebra-prominens-C7 <nowiki>[The seventh cervical vertebra at the base of the neck.]</nowiki>
** Xiphoid-process <nowiki>[The small cartilaginous process at the lower end of the sternum.]</nowiki>

!# end schema
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87 changes: 87 additions & 0 deletions library_schemas/slam/prerelease/HED_slam_1.0.0.xml
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Expand Up @@ -1512,6 +1512,93 @@
<name>inLibrary</name>
<value>slam</value>
</attribute>
<node>
<name>Head-landmark</name>
<description>Points on the head used as reference landmarks.</description>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
<node>
<name>Inion</name>
<description>The most prominent point of the occipital bone at the back of the head.</description>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
</node>
<node>
<name>Left-helix-tragus-junction-LHJ</name>
<description>The point where the helix meets the tragus of the left ear.</description>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
</node>
<node>
<name>Mastoid-process</name>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
</node>
<node>
<name>Nasion</name>
<description>The midpoint between the eyes just above the bridge of the nose.</description>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
</node>
<node>
<name>Right-helix-tragus-junction-RHJ</name>
<description>The point where the helix meets the tragus of the right ear.</description>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
</node>
<node>
<name>Vertex</name>
<description>The highest point on the head in the midline.</description>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
</node>
</node>
<node>
<name>Torso-chest-landmark</name>
<description>Points on the chest used as reference landmarks.</description>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
<node>
<name>Acromion-process</name>
<description>The outermost point of the shoulder blade.</description>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
</node>
<node>
<name>Vertebra-prominens-C7</name>
<description>The seventh cervical vertebra at the base of the neck.</description>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
</node>
<node>
<name>Xiphoid-process</name>
<description>The small cartilaginous process at the lower end of the sternum.</description>
<attribute>
<name>inLibrary</name>
<value>slam</value>
</attribute>
</node>
</node>
</node>
<node>
<name>Body</name>
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3 changes: 2 additions & 1 deletion ...hemas/slam/prerelease/hedtsv/HED_slam_1.0.0/HED_slam_1.0.0_AnnotationPropertyExternal.tsv
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Expand Up @@ -13,4 +13,5 @@ dc: subject
dc: title
dc: type
foaf: homepage
terms: license
terms: license
obo: has_dbxref
3 changes: 2 additions & 1 deletion library_schemas/slam/prerelease/hedtsv/HED_slam_1.0.0/HED_slam_1.0.0_Prefixes.tsv
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Expand Up @@ -7,4 +7,5 @@ owl: http://www.w3.org/2002/07/owl# The OWL namespace [OWL2-OVERVIEW]
prov: http://www.w3.org/ns/prov# The PROV namespace [PROV-DM]
dc: http://purl.org/dc/elements/1.1/ The Dublin Core elements
terms: http://purl.org/dc/terms/ The Dublin Core terms
foaf: http://xmlns.com/foaf/0.1/ Friend-of-a-Friend http://xmlns.com/foaf/spec/
foaf: http://xmlns.com/foaf/0.1/ Friend-of-a-Friend http://xmlns.com/foaf/spec/
obo: http://purl.obolibrary.org/obo/ Open Biomedical Ontologies
13 changes: 12 additions & 1 deletion library_schemas/slam/prerelease/hedtsv/HED_slam_1.0.0/HED_slam_1.0.0_Tag.tsv
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@@ -1,2 +1,13 @@
hedId rdfs:label Level omn:SubClassOf Attributes dc:description omn:EquivalentTo Annotations
Anatomical-landmark 0 Anatomical-item rooted=Anatomical-item A collection of specific points on the human body used for anatomical and sensor placement reference. dc:source "Original", rdfs:comment "Body landmarks are used to standardize sensor placement."
Anatomical-landmark 0 Anatomical-item rooted=Anatomical-item A collection of specific points on the human body used for anatomical and sensor placement reference. dc:source "Original", rdfs:comment "Body landmarks are used to standardize sensor placement.
Head-landmark 1 Anatomical-landmark Points on the head used as reference landmarks. dc:source "Original"
Inion 2 Head-landmark The most prominent point of the occipital bone at the back of the head.
Left-helix-tragus-junction-LHJ 2 Head-landmark The point where the helix meets the tragus of the left ear.
Mastoid-process 2 Head-landmark dc:source "Original"
Nasion 2 Head-landmark The midpoint between the eyes just above the bridge of the nose.
Right-helix-tragus-junction-RHJ 2 Head-landmark The point where the helix meets the tragus of the right ear.
Vertex 2 Head-landmark The highest point on the head in the midline.
Torso-chest-landmark 1 Anatomical-landmark Points on the chest used as reference landmarks. dc:source "Original"
Acromion-process 2 Torso-chest-landmark The outermost point of the shoulder blade. obo:has_dbxref "NCIT:C32048", obo:has_dbxref "FMA:12525", obo:has_dbxref "UBERON:0002497"
Vertebra-prominens-C7 2 Torso-chest-landmark The seventh cervical vertebra at the base of the neck. obo:has_dbxref "NCIT:C32245", obo:has_dbxref "FMA:23260", obo:has_dbxref "UBERON:0004616"
Xiphoid-process 2 Torso-chest-landmark The small cartilaginous process at the lower end of the sternum. obo:has_dbxref "NCIT:C33895", obo:has_dbxref "FMA:7488", obo:has_dbxref "UBERON:0002207"

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