Rescale green circles to image size

Rescale the radius of the green circles that mark found features to correspond with the size of the image extracted.
hoogenboom-group · Dec 20, 2023 · 5b1d077 · 5b1d077
1 parent c553e4c
commit 5b1d077
Showing 1 changed file with 3 additions and 0 deletions.
diff --git a/src/napari_psf_extractor/plotting.py b/src/napari_psf_extractor/plotting.py
@@ -44,6 +44,9 @@ def plot_mass_range(ax, mip, mass, features):
 
     background = np.ones(mip_log.shape)
 
+    fig = plt.gcf()
+    fig.set_size_inches(mip.shape[1] / fig.dpi, mip.shape[0] / fig.dpi)
+
     ax.imshow(background, cmap=fire)
     ax.plot(df['x'], df['y'], ls='', color='#00ff00',
             marker='o', ms=7, mfc='none', mew=1)