config file uploaded

- config.yaml
iLivius · May 7, 2024 · ba09390 · ba09390
1 parent 771ef64
commit ba09390
Showing 1 changed file with 16 additions and 0 deletions.
diff --git a/config/config.yaml b/config/config.yaml
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+links:
+ phix_link: ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/819/615/GCF_000819615.1_ViralProj14015/GCF_000819615.1_ViralProj14015_genomic.fna.gz
+ card_link: https://card.mcmaster.ca/download/0/broadstreet-v3.2.9.tar.bz2
+ checkv_link: https://portal.nersc.gov/CheckV/checkv-db-v1.5.tar.gz
+directories:
+  out_dir: /media/data/antonielli_dir/BacTest/output_dir
+  fastq_dir: /home/antoniellil/Downloads/reads_dir
+  blast_db: /data/x1hbrnas4/big_db/NCBI_nt_2024.04.10
+  eggnog_db: /data/x1hbrnas4/big_db/eggnog
+  gtdbtk_db: /data/x1hbrnas4/big_db/GTDB_R214/release214
+  bakta_db: /data/x1hbrnas4/big_db/bakta/db
+  platon_db: /data/x1hbrnas4/big_db/platon/db
+resources:
+  threads: 25
+  ram_gb: 256
+parameters: