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@inscopix

Inscopix

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  1. inscopix-cnmfe inscopix-cnmfe Public

    Algorithm for automated source extraction from 1P data

    Jupyter Notebook 19 7

  2. pyisx pyisx Public

    Python API for interacting with Inscopix data.

    Python 8 2

  3. CNMF_E CNMF_E Public

    Forked from zhoupc/CNMF_E

    Constrained Nonnegative Matrix Factorization for microEndoscopic data

    MATLAB 2 1

  4. CaImAn CaImAn Public

    Forked from flatironinstitute/CaImAn

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    Python 2 1

  5. isx-cnmfe-wrapper isx-cnmfe-wrapper Public

    Code to call CNMFe through CaImAn or MATLAB

    MATLAB 2

  6. mpl_moviemaker mpl_moviemaker Public

    Wrapper for the Matplotlib Animation class that facilitates movie generation

    Jupyter Notebook 1

Repositories

Showing 10 of 20 repositories
  • idas-real-time-stream Public

    Inscopix Data Acquisiton System - Real-time Stream

    inscopix/idas-real-time-stream’s past year of commit activity
    Python 0 0 0 0 Updated Nov 12, 2024
  • ideas-toolbox-public-template Public
    inscopix/ideas-toolbox-public-template’s past year of commit activity
    Makefile 1 0 0 0 Updated Oct 11, 2024
  • pyisx Public

    Python API for interacting with Inscopix data.

    inscopix/pyisx’s past year of commit activity
    Python 8 2 10 0 Updated Oct 9, 2024
  • ideas-toolbox-suite2p Public

    Set of Suite2P based tools for IDEAS

    inscopix/ideas-toolbox-suite2p’s past year of commit activity
    Python 0 0 0 0 Updated Oct 7, 2024
  • ideas-toolbox-deeplabcut Public

    Set of DeepLabCut based tools for IDEAS

    inscopix/ideas-toolbox-deeplabcut’s past year of commit activity
    Python 0 0 0 0 Updated Oct 4, 2024
  • ideas-public-python-utils Public

    Core utils and functions for IDEAS open source containers

    inscopix/ideas-public-python-utils’s past year of commit activity
    Python 0 0 0 0 Updated Oct 3, 2024
  • isxcore Public

    Core functionality of the isx C++ API

    inscopix/isxcore’s past year of commit activity
    C++ 0 0 0 0 Updated Sep 27, 2024
  • CaImAn Public Forked from flatironinstitute/CaImAn

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    inscopix/CaImAn’s past year of commit activity
    Python 2 GPL-2.0 371 0 1 Updated Sep 4, 2024
  • isxSuite2p Public Forked from MouseLand/suite2p

    cell detection in calcium imaging recordings

    inscopix/isxSuite2p’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 241 0 0 Updated Aug 28, 2024
  • HeatMaps Public Forked from lizard1111/HeatMaps

    Grid of heatmaps with time-sensitive correlations

    inscopix/HeatMaps’s past year of commit activity
    Python 0 1 0 0 Updated Jan 9, 2024
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