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Fix missing zero output for filter_non_human_reads
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fmaguire committed Feb 25, 2021
1 parent 897f455 commit 93bc296
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion scripts/filter_non_human_reads.py
Original file line number Diff line number Diff line change
Expand Up @@ -45,7 +45,7 @@ def filter_reads(contig_name, input_sam_fp, output_bam_fp):
print(f"unmapped read count = {unmapped_reads} "
f"({unmapped_reads/total_reads * 100:.2f}%)", file=sys.stderr)
else:
print("No reads found during host filtering", file=sys.stderr
print("No reads found during host filtering", file=sys.stderr)

if __name__ == '__main__':

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