more pkgdown updates

jeffkimbrel · Sep 29, 2023 · f785b87 · f785b87
1 parent d038eb0
commit f785b87
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Showing 10 changed files with 102 additions and 6 deletions.
diff --git a/NAMESPACE b/NAMESPACE
@@ -1,9 +1,13 @@
 # Generated by roxygen2: do not edit by hand
 
+export(abundance_validation)
 export(add_gradient_pos_rel_amt)
 export(add_isotopolog_label)
 export(add_taxonomy)
 export(get_sample_counts)
+export(gradient_pos_density_validation)
+export(gradient_position_validation)
+export(isotope_validation)
 export(plot_sample_curves)
 export(qsip_feature_data)
 export(qsip_sample_data)

diff --git a/R/internal/abundance_validation.R → R/abundance_validation.R b/R/internal/abundance_validation.R → R/abundance_validation.R
@@ -17,7 +17,6 @@
 #' @return Returns `NULL` if the values are valid, or a printed error
 #'
 #' @export
-#' @keywords internal
 
 
 abundance_validation = function(data, id) {

diff --git a/R/internal/gradient_pos_density_validation.R → R/gradient_pos_density_validation.R b/R/internal/gradient_pos_density_validation.R → R/gradient_pos_density_validation.R
@@ -7,7 +7,6 @@
 #' @return Returns `NULL` if the density values are valid, or a printed error
 #'
 #' @export
-#' @keywords internal
 
 gradient_pos_density_validation = function(gradient_pos_density, low = 1.55, high = 1.8) {
 

diff --git a/R/internal/gradient_position_validation.R → R/gradient_position_validation.R b/R/internal/gradient_position_validation.R → R/gradient_position_validation.R
@@ -10,7 +10,6 @@
 #'
 #' @export
 #'
-#' @keywords internal
 
 gradient_position_validation = function(gradient_position) {
   if (is.numeric(gradient_position)) {

diff --git a/R/internal/isotope_validation.R → R/isotope_validation.R b/R/internal/isotope_validation.R → R/isotope_validation.R
@@ -5,8 +5,6 @@
 #'
 #' @return Returns `NULL` if the isotope strings are valid, or a printed error
 #'
-#' @keywords internal
-#'
 #' @export
 #'
 #' @note The isotope_list may change if isotopolog_label stays a thing. Only the "heavy" isotopes will be allowed.

diff --git a/_pkgdown.yml b/_pkgdown.yml
@@ -20,7 +20,10 @@ reference:
   - has_keyword("data")
 - title: internal
   contents:
-  - has_keyword("internal")
+  - abundance_validation
+  - gradient_pos_density_validation
+  - gradient_position_validation
+  - isotope_validation
 
 articles:
 - title: Learn qSIP

diff --git a/man/abundance_validation.Rd b/man/abundance_validation.Rd
diff --git a/man/gradient_pos_density_validation.Rd b/man/gradient_pos_density_validation.Rd
diff --git a/man/gradient_position_validation.Rd b/man/gradient_position_validation.Rd
diff --git a/man/isotope_validation.Rd b/man/isotope_validation.Rd