Publish

.github/workflows/.ci.yml

@@ -64,6 +64,12 @@ jobs:
       with:
         name: 'Wheel for Python ${{ matrix.python }}'
         path: dist/pycistem*.whl
+    - name: Publish
+        if: contains(github.ref, 'tags')
+        env:
+          POETRY_PYPI_TOKEN_PYPI: ${{ secrets.PYPI_TOKEN }}
+        run: |
+          poetry publish
         
 
 

build.py

@@ -23,7 +23,7 @@
 wxlibflags = wxlibflags.strip()
 
 # This code pulls come key compile info out of the config.log file
-__version__ = "0.0.1"
+__version__ = "0.1.3"
 __compiler__ = "icpc"
 __WX_FLAGS__ = wxflags + "  -DwxUSE_GUI=0 -IcisTEM/build/icpc"
 __CPP_FLAGS__ = "-fPIC -O3 -no-prec-div -no-prec-sqrt -w2 -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -DEXPERIMENTAL -DMKL -mkl=sequential -fopenmp"

pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pycistem"
-version = "0.1.0"
+version = "0.1.3"
 description = ""
 authors = ["Johannes Elferich <[email protected]>"]
 build = "build.py"

tests/generate_runprofile.py

@@ -0,0 +1,34 @@
+from pycistem.core import *
+
+hosts= [
+    "prague",
+    "helsinki",
+    "budapest",
+    "palermo",
+    "istanbul",
+    "kyiv",
+    "bucharest",
+    "warsaw",
+    "barcelona",
+    "milano",
+    "manchester",
+    "sofia"
+]
+
+manager_command = "/groups/cryoadmin/software/CISTEM/2.0.0-alpha-70-d11eb1e/$command"
+program_command = "/groups/elferich/cistem_binaries/$command"
+num_threads =2 
+delay=100
+rpm = RunProfileManager()
+# 96 GPus
+rp = RunProfile()
+rp.name = "96GPUs"
+rp.manager_command = manager_command
+rp.RemoveAll()
+
+for host in hosts:
+    for igpu in range(0,8):
+        rp.AddCommand(f'ssh -f {host} "unset CUDA_VISIBLE_DEVICES && export CUDA_VISIBLE_DEVICES={igpu} && {program_command}"',1,num_threads,False,0,delay)
+
+rpm.AddProfile(rp)
+rpm.WriteRunProfilesToDisk("/tmp/rr.txt",[0])