Add coverage CI

.github/workflows/ci.yml

@@ -50,15 +50,10 @@ jobs:
         run: |
           python -m pip install -U pip
           # if running a cron job, we add the --pre flag to test against pre-releases
-          python -m pip install -e ".[dev]" ${{ github.event_name == 'schedule' && '--pre' || ''  }}
+          python -m pip install ".[dev]" ${{ github.event_name == 'schedule' && '--pre' || ''  }}
 
       - name: 🧪 Run Tests
-        run: pytest --color=yes --cov --cov-config=pyproject.toml --cov-report=xml --cov-report=term-missing 
-
-      - name: Coverage
-        uses: codecov/codecov-action@v3
-        with:
-          version: v0.7.3
+        run: pytest
 
   deploy:
     name: Release

.github/workflows/coverage.yml

@@ -0,0 +1,48 @@
+name: Coverage
+
+on:
+  push:
+    branches:
+      - main
+    tags:
+      - "v*"
+  pull_request:
+
+jobs:
+
+  test:
+    name: ${{ matrix.platform }} (${{ matrix.python-version }})
+    runs-on: ${{ matrix.platform }}
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.10"]
+        platform: [ubuntu-latest]
+
+    steps:
+      - name: 🛑 Cancel Previous Runs
+        uses: styfle/[email protected]
+        with:
+          access_token: ${{ github.token }}
+
+      - uses: actions/checkout@v3
+
+      - name: 🐍 Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v4
+        with:
+          python-version: ${{ matrix.python-version }}
+          cache-dependency-path: "pyproject.toml"
+          cache: "pip"
+
+      - name: Install Dependencies
+        run: |
+          python -m pip install -U pip
+          python -m pip install -e ".[dev]"
+
+      - name: 🧪 Run Tests
+        run: pytest --color=yes --cov --cov-config=pyproject.toml --cov-report=xml --cov-report=term-missing 
+
+      - name: Coverage
+        uses: codecov/codecov-action@v3
+        with:
+          version: v0.7.3

README.md

@@ -7,7 +7,6 @@
 [![codecov](https://codecov.io/gh/juglab/MicroSSIM/branch/main/graph/badge.svg)](https://codecov.io/gh/juglab/MicroSSIM)
 
 
-
 MicroSSIM is an image measure aimed at addressing the shortcomings of the Structural
 Similarity Index Measure (SSIM), in particular in the context of microscopy images. Indeed,
 in microscopy, degraded images (e.g. lower signal to noise ratio) often have a different