-
Notifications
You must be signed in to change notification settings - Fork 1
Issues: justin13601/ACES
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Author
Label
Projects
Milestones
Assignee
Sort
Issues list
Add predicate warning or specific error code
Bug
Something isn't working
Code Cleanliness/Ease of Development
Relates to the cleanliness, organization, and overall maintainability of the codebase
priority:high
Things that are high priority, but do not warrant an immediate hotfix
#146
opened Oct 25, 2024 by
rvandewater
Allow derived predicates between static predicates and plain predicates
Configuration
For issues relating to the configuration language
Enhancement
New feature or request
Impacts Benchmark
Impacts the 2024 Summer / Fall Distributed MEDS Benchmarking Effort
priority:high
Things that are high priority, but do not warrant an immediate hotfix
#144
opened Oct 23, 2024 by
justin13601
Add warning when all labels are False
Enhancement
New feature or request
priority:high
Things that are high priority, but do not warrant an immediate hotfix
Task DataFrame Format
Relates to the output of a cohort extraction as well as how intermediates are stored
Usability & Interface
For things to make ACES more usable that don't involve fundamental configuration language changes
#142
opened Oct 22, 2024 by
rvandewater
Task definition matters in terms of memory usage
Computational Performance
Relates to the computational efficiency of the cohort extraction
Documentation
Improvements or additions to documentation
priority:high
Things that are high priority, but do not warrant an immediate hotfix
#141
opened Oct 22, 2024 by
rvandewater
Support nesting derived predicates beyond 2 levels
Configuration
For issues relating to the configuration language
Expand Predicates Scope
For issues relating to allowing more complex expressions in predicate configurations
priority:medium
Things that are medium priority, and warrant attention for next larger version updates
#137
opened Oct 1, 2024 by
justin13601
Predicate expansion for ESGPT
Configuration
For issues relating to the configuration language
Enhancement
New feature or request
Expand Predicates Scope
For issues relating to allowing more complex expressions in predicate configurations
priority:medium
Things that are medium priority, and warrant attention for next larger version updates
#136
opened Sep 26, 2024 by
justin13601
We shouldn't need to use expand_shards
Code Cleanliness/Ease of Development
Relates to the cleanliness, organization, and overall maintainability of the codebase
#128
opened Sep 1, 2024 by
mmcdermott
We should distribute / package typing information
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
#127
opened Aug 30, 2024 by
mmcdermott
What should we do about additional extracted data outside the scope of the MEDS label schema?
MEDS Compatibility
Compatibility with the Medical Event Data Standard (MEDS) data schema
Needs Clarification
For issues that need clarification before they can be addressed.
priority:medium
Things that are medium priority, and warrant attention for next larger version updates
#97
opened Aug 11, 2024 by
mmcdermott
Add support for conditional predicates on static or historic data (e.g., a different range of lab values for male vs. female patients)
Expand Predicates Scope
For issues relating to allowing more complex expressions in predicate configurations
Impacts Benchmark
Impacts the 2024 Summer / Fall Distributed MEDS Benchmarking Effort
Needs Clarification
For issues that need clarification before they can be addressed.
priority:medium
Things that are medium priority, and warrant attention for next larger version updates
#94
opened Aug 6, 2024 by
mmcdermott
Extended predicate expansions
Enhancement
New feature or request
Expand Predicates Scope
For issues relating to allowing more complex expressions in predicate configurations
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
Usability & Interface
For things to make ACES more usable that don't involve fundamental configuration language changes
#66
opened Jun 25, 2024 by
justin13601
1 of 5 tasks
Improve tutorials for experimental partners
Documentation
Improvements or additions to documentation
External
External contributions from partners
priority:medium
Things that are medium priority, and warrant attention for next larger version updates
Improve testing
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
Testing
Testing functionality
LLM integration for extraction
Enhancement
New feature or request
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
Usability & Interface
For things to make ACES more usable that don't involve fundamental configuration language changes
#55
opened Jun 10, 2024 by
justin13601
3 tasks
Directly support tasks with multiple endpoints
Configuration
For issues relating to the configuration language
Enhancement
New feature or request
Expand Extraction Scope
For extracting cohorts with more complex logic, independent from predicate complexity
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
#54
opened Jun 10, 2024 by
justin13601
1 task
Support for additional task types and outputs
Enhancement
New feature or request
Expand Extraction Scope
For extracting cohorts with more complex logic, independent from predicate complexity
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
Task DataFrame Format
Relates to the output of a cohort extraction as well as how intermediates are stored
#53
opened Jun 10, 2024 by
justin13601
8 tasks
Directly support case-control matching
Configuration
For issues relating to the configuration language
Documentation
Improvements or additions to documentation
Enhancement
New feature or request
External
External contributions from partners
Needs Clarification
For issues that need clarification before they can be addressed.
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
Task DataFrame Format
Relates to the output of a cohort extraction as well as how intermediates are stored
#51
opened Jun 10, 2024 by
justin13601
1 task
Promote generalizability across other common data models
Documentation
Improvements or additions to documentation
Enhancement
New feature or request
External
External contributions from partners
MEDS Compatibility
Compatibility with the Medical Event Data Standard (MEDS) data schema
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
Usability & Interface
For things to make ACES more usable that don't involve fundamental configuration language changes
#50
opened Jun 10, 2024 by
justin13601
3 tasks
Allow chaining of multiple task configurations
Enhancement
New feature or request
Expand Extraction Scope
For extracting cohorts with more complex logic, independent from predicate complexity
Needs Clarification
For issues that need clarification before they can be addressed.
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
#49
opened Jun 10, 2024 by
justin13601
1 task
Support additional label types
Enhancement
New feature or request
priority:medium
Things that are medium priority, and warrant attention for next larger version updates
Support timestamp binning for use in predicates or as qualifiers
Configuration
For issues relating to the configuration language
Enhancement
New feature or request
Needs Clarification
For issues that need clarification before they can be addressed.
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
#44
opened Jun 10, 2024 by
justin13601
1 task
Directly support nested configuration files
Configuration
For issues relating to the configuration language
Enhancement
New feature or request
Expand Extraction Scope
For extracting cohorts with more complex logic, independent from predicate complexity
priority:medium
Things that are medium priority, and warrant attention for next larger version updates
#43
opened Jun 10, 2024 by
justin13601
1 task
Extract indexing information for easier setup of downstream tasks
Enhancement
New feature or request
priority:low
Things that are not on an immediate roadmap, but may be addressed in time or by contributors
Task DataFrame Format
Relates to the output of a cohort extraction as well as how intermediates are stored
#37
opened Jun 3, 2024 by
justin13601
1 of 2 tasks
ProTip!
Add no:assignee to see everything that’s not assigned.