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1. Collagen-SHG_Synthesis Collagen-SHG_Synthesis Public

   Generating SHG images of collagen from Bright-Field images of H&E stained tissue

   Jupyter Notebook 1

2. Registration Registration Public

   SHG_H&E_PolScope registration

   MATLAB

3. models models Public

   Forked from tensorflow/models

   Models and examples built with TensorFlow

   Python

4. PDAC-Prognosis PDAC-Prognosis Public

   Using a trained ResNet and Cox Proportional Hazard model to estimate the PDAC survival

   Jupyter Notebook

5. curvelets curvelets Public

   Forked from uw-loci/curvelets

   Curvelet-Transform based fibrillar collagen quantification (CurveAlign and CT-FIRE)

   MATLAB

6. BGsubtraction-and-Autofocus BGsubtraction-and-Autofocus Public

   This program runs background subtraction and autofocusing for bright-field imaging

   Makefile