Version 0.4.0

Changed

• Small bug fixes and usability improvements
• Improved documentation
• Renamed options for dist.type in estimateExpressionShiftMagnitudes to match the paper figure
• Renamed inner estimateExpressionShiftMagnitudes to estimateExpressionChange (CRAN requirement)
• Renamed p.adj.cutoff to p.adj in estimateDEStabilityPerGene for consistency with other functions