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v0.6

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@ksahlin ksahlin released this 20 Feb 07:01
· 1411 commits to main since this release
a8b7852

Version 0.6 fixes a crucial bug introduced in v0.5 and has two additional bug fixes that improve accuracy. It is highly recommended to update to this version.

  1. Crucial bugfix to v0.5 causing rare but occasional alignments to very long reference regions due to bug in coordinate. This becomes detrimental to speed.
  2. Identifying symmetrical hash collisions and in those cases test the reverse orientation. This leads to a further slight bump in alignment accuracy over previous versions, particularly for shorter read lengths.
  3. Fix to rare but occasional uninitialized joint alignment score S calculation that would cause suboptimal alignment
  4. Fixes reporting of template len field in SAM output if deletion in alignment.