v0.6
Version 0.6 fixes a crucial bug introduced in v0.5 and has two additional bug fixes that improve accuracy. It is highly recommended to update to this version.
- Crucial bugfix to v0.5 causing rare but occasional alignments to very long reference regions due to bug in coordinate. This becomes detrimental to speed.
- Identifying symmetrical hash collisions and in those cases test the reverse orientation. This leads to a further slight bump in alignment accuracy over previous versions, particularly for shorter read lengths.
- Fix to rare but occasional uninitialized joint alignment score
S
calculation that would cause suboptimal alignment - Fixes reporting of template len field in SAM output if deletion in alignment.