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@ksahlin ksahlin released this 17 Apr 08:10
· 1345 commits to main since this release
v0.7.1
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Learn about vigilant mode.

Improvements mainly for large repetitive genomes.

  • Introduces maximum limit on repetitive seeds before calling optimized merged match finder (optimized for repetitive reads). This reduces the computational time if the genome is large and repetitive, e.g., maize (2.4Gb), rye (7.8Gb), significantly.
  • Fixes sam header issue #22
  • Removes dependency on ksw2.
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