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@lehtiolab

Lehtiö lab

Research group of Janne Lehtiö at Scilifelab/Karolinska Institutet

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  1. proteogenomics-analysis-workflow proteogenomics-analysis-workflow Public

    IPAW: a Nextflow workflow for proteogenomics

    Python 25 9

  2. verkstad_client verkstad_client Public

    The alternative ToDo app, optimized for proteomics mass spectrometer maintenance.

    Vue 6

  3. msstitch msstitch Public

    MS proteomics post-processing utilities

    Python 5 3

  4. nf-helaqc_refine nf-helaqc_refine Public

    Lehtiö lab analysis workflows

    Nextflow 5 4

  5. ddamsproteomics ddamsproteomics Public

    A Nextflow MS DDA proteomics pipeline

    Nextflow 3 5

  6. Code-Availability Code-Availability Public

    Code availability for Lehtiö lab papers

    R 3 6

Repositories

Showing 10 of 17 repositories
  • kantele Public

    Lab proteomics raw and search data management

    lehtiolab/kantele’s past year of commit activity
    Python 2 1 22 1 Updated Nov 18, 2024
  • ddamsproteomics Public

    A Nextflow MS DDA proteomics pipeline

    lehtiolab/ddamsproteomics’s past year of commit activity
    Nextflow 3 MIT 5 8 1 Updated Nov 5, 2024
  • static-resources Public

    Resources that are unlikely to change often, such as configs, test, or infrastructure data

    lehtiolab/static-resources’s past year of commit activity
    0 MIT 0 0 0 Updated Nov 5, 2024
  • nf-msconvert Public

    Leverages proteowizard's msconvert in a nextflow workflow

    lehtiolab/nf-msconvert’s past year of commit activity
    Nextflow 0 MIT 1 0 0 Updated Oct 11, 2024
  • nf-helaqc_refine Public

    Lehtiö lab analysis workflows

    lehtiolab/nf-helaqc_refine’s past year of commit activity
    Nextflow 5 MIT 4 0 0 Updated Oct 10, 2024
  • nf-labelcheck Public Forked from glormph/nf-core-labelcheck

    Proteomics nextflow labelcheck pipeline with report

    lehtiolab/nf-labelcheck’s past year of commit activity
    Nextflow 1 MIT 1 1 0 Updated Sep 25, 2024
  • lehtiolab.github.io Public

    Code & development space for producing new lehtiolab website

    lehtiolab/lehtiolab.github.io’s past year of commit activity
    JavaScript 0 0 4 0 Updated Sep 25, 2024
  • proteogenomics-analysis-workflow Public

    IPAW: a Nextflow workflow for proteogenomics

    lehtiolab/proteogenomics-analysis-workflow’s past year of commit activity
    Python 25 9 7 1 Updated Aug 8, 2024
  • msstitch Public

    MS proteomics post-processing utilities

    lehtiolab/msstitch’s past year of commit activity
    Python 5 MIT 3 0 0 Updated May 28, 2024
  • meltmatch Public
    lehtiolab/meltmatch’s past year of commit activity
    Jupyter Notebook 0 GPL-3.0 0 0 0 Updated Mar 20, 2024
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