-
Notifications
You must be signed in to change notification settings - Fork 0
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
Showing
6 changed files
with
190 additions
and
12 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,125 @@ | ||
| import React, { useState, useEffect } from 'react'; | ||
| import Container from '@material-ui/core/Container'; | ||
| import Grid from '@material-ui/core/Grid'; | ||
| import Typography from '@material-ui/core/Typography'; | ||
| import FormControl from '@material-ui/core/FormControl'; | ||
| import Select from '@material-ui/core/Select'; | ||
| import MenuItem from '@material-ui/core/MenuItem'; | ||
| import InputLabel from '@material-ui/core/InputLabel'; | ||
| import Table from '@material-ui/core/Table'; | ||
| import TableBody from '@material-ui/core/TableBody'; | ||
| import TableCell from '@material-ui/core/TableCell'; | ||
| import TableContainer from '@material-ui/core/TableContainer'; | ||
| import TableHead from '@material-ui/core/TableHead'; | ||
| import TableRow from '@material-ui/core/TableRow'; | ||
| import {json as d3Json} from 'd3-fetch'; | ||
| import {ascending} from 'd3-array'; | ||
| import queryString from 'query-string'; | ||
| import {withRouter} from 'react-router'; | ||
|
|
||
| const SuperDendrixResults = withRouter(({ | ||
| history, | ||
| location, | ||
| }) => { | ||
| // Load the manifest with the list of datasets | ||
| const dataURL = `${process.env.REACT_APP_SUPERDENDRIX_DATA_URL}/manifest.json`; | ||
| const [datasets, setDatasets] = useState([]); | ||
| const [selectedDataset, setSelectedDataset] = useState('19Q1'); | ||
| useEffect( () => { | ||
| d3Json(dataURL) | ||
| .then((jsonData) => setDatasets(jsonData.datasets)) | ||
| .catch((error) => { | ||
| console.error(error) | ||
| }) | ||
| }, [dataURL]); | ||
|
|
||
| // Load the SuperDendrix results | ||
| const superDendrixResultsURL = `${process.env.REACT_APP_SUPERDENDRIX_DATA_URL}/${selectedDataset}/superdendrix-results.json`; | ||
| const [superDendrixResults, setSuperDendrixResults] = useState([]); | ||
| useEffect(() => { | ||
| d3Json(superDendrixResultsURL) | ||
| .then((jsonData) => setSuperDendrixResults(jsonData.sets)) | ||
| .catch( (error) => { | ||
| console.error(error) | ||
| }) | ||
| }, [selectedDataset, superDendrixResultsURL, setSuperDendrixResults]); | ||
|
|
||
| return ( | ||
| <Container maxWidth="md" style={{ height: 'calc(100% - 64px)'}}> | ||
| <Grid container direction="column" style={{ height: '100%', flexWrap: 'nowrap' }}> | ||
| <Grid item> | ||
| <Typography variant="h5">SuperDendrix Results</Typography> | ||
| </Grid> | ||
| <Grid item> | ||
| <FormControl fullWidth> | ||
| <InputLabel id="dataset-select">Dataset</InputLabel> | ||
| <Select | ||
| labelId="dataset-select" | ||
| value={selectedDataset} | ||
| onChange={(e) => setSelectedDataset(e.target.value)} | ||
| > | ||
| { | ||
| datasets.map((dataset) => ( | ||
| <MenuItem value={dataset} key={dataset}>DepMap { dataset }</MenuItem> | ||
| )) | ||
| } | ||
| </Select> | ||
| </FormControl> | ||
| </Grid> | ||
| <Grid item style={{ marginTop: '10px' }}> | ||
| Click on the row to view the set in the Explorer! | ||
| </Grid> | ||
| <Grid item style={{ marginTop: '10px' }}> | ||
| <TableContainer component="div"> | ||
| <Table aria-label="superdendrix results table" size="small"> | ||
| <TableHead> | ||
| <TableRow> | ||
| <TableCell><b>Profile Name</b></TableCell> | ||
| <TableCell><b>Alterations</b></TableCell> | ||
| <TableCell align="right"><b>Weight <i>W(M)</i></b></TableCell> | ||
| <TableCell align="right"><b>FDR</b></TableCell> | ||
| </TableRow> | ||
| </TableHead> | ||
| </Table> | ||
| </TableContainer> | ||
| </Grid> | ||
| <Grid item style={{ overflowY: 'scroll', flexGrow: 1, flexShrink: 1 }}> | ||
| <TableContainer component="div"> | ||
| <Table aria-label="superdendrix results table" size="small"> | ||
| <TableBody> | ||
| { | ||
| superDendrixResults.map(({ | ||
| profile, | ||
| alterations, | ||
| weight, | ||
| fdr, | ||
| }, i) => ( | ||
| <TableRow | ||
| key={i} | ||
| onClick={() => { | ||
| history.push({ | ||
| pathname: '/', | ||
| search: queryString.stringify({ | ||
| alterations: alterations.sort(ascending), | ||
| profileName: profile, | ||
| }) | ||
| }) | ||
| }} | ||
| style={{ cursor: 'pointer' }} | ||
| > | ||
| <TableCell>{profile}</TableCell> | ||
| <TableCell>{alterations.join(', ')}</TableCell> | ||
| <TableCell align="right">{ weight }</TableCell> | ||
| <TableCell align="right">{ fdr }</TableCell> | ||
| </TableRow> | ||
| ))} | ||
| </TableBody> | ||
| </Table> | ||
| </TableContainer> | ||
| </Grid> | ||
| </Grid> | ||
| </Container> | ||
| ); | ||
| }); | ||
|
|
||
| export default SuperDendrixResults; |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -1,8 +1,10 @@ | ||
| import About from './About.js' | ||
| import Credits from './Credits.js' | ||
| import DataExplorer from './explorer' | ||
| import About from './About.js'; | ||
| import Credits from './Credits.js'; | ||
| import DataExplorer from './explorer'; | ||
| import SuperDendrixResults from './SuperDendrixResults'; | ||
| export { | ||
| About, | ||
| Credits, | ||
| DataExplorer, | ||
| SuperDendrixResults, | ||
| } |