Adds logging to tests failing on CloudBurst

improver_tests/nbhood/nbhood/test_GeneratePercentilesFromANeighbourhood.py

@@ -18,7 +18,7 @@
     add_coordinate,
     set_up_variable_cube,
 )
-
+from logging import debug
 
 class Test_make_percentile_cube(IrisTest):
 
@@ -299,6 +299,7 @@ def test_single_point_on_corner(self):
         result = GeneratePercentilesFromANeighbourhood(
             2000, percentiles=percentiles
         ).pad_and_unpad_cube(self.cube, kernel)
+        debug(result.data)
         self.assertArrayAlmostEqual(result.data, expected)
 
 
@@ -558,6 +559,7 @@ def test_single_point_low_percentiles(self):
         result = GeneratePercentilesFromANeighbourhood(
             radius, percentiles=percentiles
         ).process(self.cube)
+        debug(result.data)
         self.assertArrayAlmostEqual(result.data, expected)
 
     def test_point_pair(self):
@@ -660,6 +662,7 @@ def test_number_of_percentiles_equals_number_of_points(self):
         result = GeneratePercentilesFromANeighbourhood(
             radius, percentiles=percentiles
         ).process(cube)
+        debug(result.data)
         self.assertArrayAlmostEqual(result.data, expected)
 
     def test_number_of_points_half_of_number_of_percentiles(self):
@@ -769,6 +772,7 @@ def test_number_of_points_half_of_number_of_percentiles(self):
         result = GeneratePercentilesFromANeighbourhood(
             radius, percentiles=percentiles
         ).process(cube)
+        debug(result.data)
         self.assertArrayAlmostEqual(result.data, expected)
 
     def test_circle_bigger_than_domain(self):

improver_tests/regrid/test_RegridWithLandSeaMask.py

@@ -17,7 +17,7 @@
 from improver.regrid.landsea import RegridLandSea
 from improver.synthetic_data.set_up_test_cubes import set_up_variable_cube
 from improver.utilities.pad_spatial import pad_cube_with_halo
-
+from logging import debug
 
 def modify_cube_coordinate_value(cube, coord_x, coord_y):
     """modify x(longitude) & y(latitude) andcoordinates for a cube"""
@@ -207,7 +207,7 @@ def test_regrid_nearest_with_mask_2():
     np.testing.assert_allclose(
         regrid_nearest_with_mask.data, expected_results, atol=1e-3
     )
-
+    debug(regrid_nearest_with_mask.data)
     # consider constant field
     cube_in.data = np.repeat(1.0, 20).reshape(4, 5).astype(np.float32)
     regrid_nearest_with_mask = RegridLandSea(
@@ -260,7 +260,7 @@ def test_regrid_bilinear_with_mask_2():
     np.testing.assert_allclose(
         regrid_bilinear_with_mask.data, expected_results, atol=1e-3
     )
-
+    debug(regrid_bilinear_with_mask.data)
     # consider constant field
     cube_in.data = np.repeat(1.0, 20).reshape(4, 5).astype(np.float32)
     regrid_bilinear_with_mask = RegridLandSea(

improver_tests/spotdata/test_NeighbourSelection.py

@@ -15,7 +15,7 @@
 
 from improver.metadata.utilities import create_coordinate_hash
 from improver.spotdata.neighbour_finding import NeighbourSelection
-
+from logging import debug
 
 class Test_NeighbourSelection(IrisTest):
 
@@ -870,7 +870,7 @@ def test_global_tied_case_nearest(self):
             self.global_sites, self.global_orography, self.global_land_mask
         )
         expected = [[[2], [4], [2]]]
-
+        debug(result.data)        
         self.assertArrayEqual(result.data, expected)
 
     def test_global_tied_case_nearest_land(self):
@@ -909,7 +909,7 @@ def test_global_tied_case_nearest_land_min_dz(self):
             self.global_sites, self.global_orography, self.global_land_mask
         )
         expected = [[[4], [4], [0]]]
-
+        debug(result.data)
         self.assertArrayEqual(result.data, expected)
 
 

pytest.ini

@@ -4,3 +4,8 @@ markers =
     slow: mark tests as slow (eg. typically more than 5 seconds)
     acc: mark tests as whole plugin level acceptance tests
 testpaths = improver_tests
+log_file_mode = a+
+log_file_format = %(asctime)s %(filename)s->%(funcName)s:%(lineno)s %(levelname)s: %(message)s
+log_date_format = %Y-%m-%d %H:%M:%S
+log_file=/home/h04/mspelman/improver/pytest_log.log
+log_cli_level=DEBUG