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  1. genomic-medicine-sweden/jasen genomic-medicine-sweden/jasen Public

    Bacterial typing pipeline for clinical NGS data. Written in NextFlow, Python & Bash.

    Nextflow 9 11

  2. Clinical-Genomics-Lund/gens Clinical-Genomics-Lund/gens Public

    JavaScript 12 5

  3. Clinical-Genomics-Lund/bonsai Clinical-Genomics-Lund/bonsai Public

    Visualize and analyze resistance and outbreak of bacterial pathogen

    Standard ML 4 1

  4. Clinical-Genomics/scout Clinical-Genomics/scout Public

    VCF visualization interface

    HTML 152 46