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env.yml
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env.yml
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name: adapters
channels:
- pytorch
- dglteam
- bioconda
- defaults
- conda-forge
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=2_kmp_llvm
- abseil-cpp=20211102.0=hd4dd3e8_0
- absl-py=1.4.0=py38h06a4308_0
- aiofiles=22.1.0=py38h06a4308_0
- aiohttp=3.8.5=py38h5eee18b_0
- aiosignal=1.2.0=pyhd3eb1b0_0
- aiosqlite=0.18.0=py38h06a4308_0
- antlr-python-runtime=4.9.3=pyhd8ed1ab_1
- anyio=3.5.0=py38h06a4308_0
- argon2-cffi=21.3.0=pyhd3eb1b0_0
- argon2-cffi-bindings=21.2.0=py38h7f8727e_0
- arrow-cpp=11.0.0=h374c478_2
- asttokens=2.0.5=pyhd3eb1b0_0
- async-timeout=4.0.2=py38h06a4308_0
- attrs=22.1.0=py38h06a4308_0
- aws-c-common=0.6.8=h5eee18b_1
- aws-c-event-stream=0.1.6=h6a678d5_6
- aws-checksums=0.1.11=h5eee18b_2
- aws-sdk-cpp=1.8.185=h721c034_1
- babel=2.11.0=py38h06a4308_0
- backcall=0.2.0=pyhd3eb1b0_0
- beautifulsoup4=4.12.2=py38h06a4308_0
- blas=2.116=mkl
- blas-devel=3.9.0=16_linux64_mkl
- bleach=4.1.0=pyhd3eb1b0_0
- blessings=1.7=py38h06a4308_1002
- blinker=1.4=py38h06a4308_0
- boost-cpp=1.73.0=h7f8727e_12
- bottleneck=1.3.5=py38h7deecbd_0
- brotli=1.0.9=h5eee18b_7
- brotli-bin=1.0.9=h5eee18b_7
- brotlipy=0.7.0=py38h0a891b7_1005
- bzip2=1.0.8=h7f98852_4
- c-ares=1.19.1=h5eee18b_0
- ca-certificates=2023.08.22=h06a4308_0
- cachetools=4.2.2=pyhd3eb1b0_0
- certifi=2023.7.22=py38h06a4308_0
- cffi=1.15.1=py38h4a40e3a_2
- charset-normalizer=2.1.1=pyhd8ed1ab_0
- click=8.0.4=py38h06a4308_0
- colorama=0.4.6=pyhd8ed1ab_0
- comm=0.1.2=py38h06a4308_0
- contourpy=1.0.5=py38hdb19cb5_0
- cryptography=38.0.3=py38h80a4ca7_0
- cudatoolkit=11.3.1=h9edb442_10
- cycler=0.11.0=pyhd3eb1b0_0
- datasets=2.12.0=py38h06a4308_0
- dbus=1.13.18=hb2f20db_0
- debugpy=1.6.7=py38h6a678d5_0
- decorator=5.1.1=pyhd3eb1b0_0
- defusedxml=0.7.1=pyhd3eb1b0_0
- dgl-cuda11.3=0.9.1post1=py38_0
- dill=0.3.6=py38h06a4308_0
- entrypoints=0.4=py38h06a4308_0
- executing=0.8.3=pyhd3eb1b0_0
- expat=2.5.0=h6a678d5_0
- ffmpeg=4.3=hf484d3e_0
- filelock=3.9.0=py38h06a4308_0
- fontconfig=2.14.1=hef1e5e3_0
- fonttools=4.25.0=pyhd3eb1b0_0
- freetype=2.12.1=hca18f0e_0
- frozenlist=1.3.3=py38h5eee18b_0
- fsspec=2023.4.0=py38h06a4308_0
- gflags=2.2.2=he6710b0_0
- giflib=5.2.1=h5eee18b_3
- glib=2.69.1=he621ea3_2
- glog=0.5.0=h2531618_0
- gmp=6.2.1=h58526e2_0
- gnutls=3.6.13=h85f3911_1
- google-auth=2.22.0=py38h06a4308_0
- google-auth-oauthlib=0.5.2=py38h06a4308_0
- gpustat=0.6.0=pyhd3eb1b0_1
- grpc-cpp=1.48.2=he1ff14a_1
- grpcio=1.48.2=py38he1ff14a_1
- gst-plugins-base=1.14.1=h6a678d5_1
- gstreamer=1.14.1=h5eee18b_1
- huggingface_hub=0.15.1=py38h06a4308_0
- icu=58.2=he6710b0_3
- idna=3.4=pyhd8ed1ab_0
- importlib-metadata=6.0.0=py38h06a4308_0
- importlib_metadata=6.0.0=hd3eb1b0_0
- importlib_resources=5.2.0=pyhd3eb1b0_1
- ipykernel=6.25.0=py38h2f386ee_0
- ipython=8.12.2=py38h06a4308_0
- ipython_genutils=0.2.0=pyhd3eb1b0_1
- ipywidgets=8.0.4=py38h06a4308_0
- jedi=0.18.1=py38h06a4308_1
- jinja2=3.1.2=py38h06a4308_0
- jpeg=9e=h166bdaf_2
- json5=0.9.6=pyhd3eb1b0_0
- jsonschema=4.17.3=py38h06a4308_0
- jupyter=1.0.0=py38h06a4308_8
- jupyter_client=7.4.9=py38h06a4308_0
- jupyter_console=6.6.3=py38h06a4308_0
- jupyter_core=5.3.0=py38h06a4308_0
- jupyter_events=0.6.3=py38h06a4308_0
- jupyter_server=2.5.0=py38h06a4308_0
- jupyter_server_fileid=0.9.0=py38h06a4308_0
- jupyter_server_terminals=0.4.4=py38h06a4308_1
- jupyter_server_ydoc=0.8.0=py38h06a4308_1
- jupyter_ydoc=0.2.4=py38h06a4308_0
- jupyterlab=3.6.3=py38h06a4308_0
- jupyterlab_pygments=0.1.2=py_0
- jupyterlab_server=2.22.0=py38h06a4308_0
- jupyterlab_widgets=3.0.5=py38h06a4308_0
- kiwisolver=1.4.4=py38h6a678d5_0
- krb5=1.20.1=h143b758_1
- lame=3.100=h166bdaf_1003
- lcms2=2.14=h6ed2654_0
- ld_impl_linux-64=2.39=hc81fddc_0
- lerc=4.0.0=h27087fc_0
- libblas=3.9.0=16_linux64_mkl
- libboost=1.73.0=h28710b8_12
- libbrotlicommon=1.0.9=h5eee18b_7
- libbrotlidec=1.0.9=h5eee18b_7
- libbrotlienc=1.0.9=h5eee18b_7
- libcblas=3.9.0=16_linux64_mkl
- libclang=10.0.1=default_hb85057a_2
- libcurl=8.2.1=h251f7ec_0
- libdeflate=1.14=h166bdaf_0
- libedit=3.1.20221030=h5eee18b_0
- libev=4.33=h7f8727e_1
- libevent=2.1.12=hdbd6064_1
- libffi=3.4.2=h7f98852_5
- libgcc-ng=12.2.0=h65d4601_19
- libgfortran-ng=12.2.0=h69a702a_19
- libgfortran5=12.2.0=h337968e_19
- libgomp=12.2.0=h65d4601_19
- libiconv=1.17=h166bdaf_0
- liblapack=3.9.0=16_linux64_mkl
- liblapacke=3.9.0=16_linux64_mkl
- libllvm10=10.0.1=hbcb73fb_5
- libnghttp2=1.52.0=h2d74bed_1
- libnsl=2.0.0=h7f98852_0
- libpng=1.6.38=h753d276_0
- libpq=12.15=hdbd6064_1
- libprotobuf=3.20.3=he621ea3_0
- libsodium=1.0.18=h7b6447c_0
- libsqlite=3.39.4=h753d276_0
- libssh2=1.10.0=hdbd6064_2
- libstdcxx-ng=12.2.0=h46fd767_19
- libthrift=0.15.0=h1795dd8_2
- libtiff=4.4.0=h55922b4_4
- libuuid=2.32.1=h7f98852_1000
- libwebp=1.2.4=h11a3e52_1
- libwebp-base=1.2.4=h166bdaf_0
- libxcb=1.15=h7f8727e_0
- libxkbcommon=1.0.1=hfa300c1_0
- libxml2=2.9.14=h74e7548_0
- libxslt=1.1.35=h4e12654_0
- libzlib=1.2.13=h166bdaf_4
- llvm-openmp=15.0.4=he0ac6c6_0
- lxml=4.9.1=py38h1edc446_0
- lz4-c=1.9.4=h6a678d5_0
- markdown=3.4.1=py38h06a4308_0
- markupsafe=2.1.1=py38h7f8727e_0
- matplotlib=3.7.2=py38h06a4308_0
- matplotlib-base=3.7.2=py38h1128e8f_0
- matplotlib-inline=0.1.6=py38h06a4308_0
- mistune=0.8.4=py38h7b6447c_1000
- mkl=2022.1.0=h84fe81f_915
- mkl-devel=2022.1.0=ha770c72_916
- mkl-include=2022.1.0=h84fe81f_915
- multidict=6.0.2=py38h5eee18b_0
- multiprocess=0.70.14=py38h06a4308_0
- munkres=1.0.7=py_1
- nb_conda_kernels=2.3.1=py38h06a4308_0
- nbclassic=0.5.5=py38h06a4308_0
- nbclient=0.5.13=py38h06a4308_0
- nbconvert=6.5.4=py38h06a4308_0
- nbformat=5.9.2=py38h06a4308_0
- ncurses=6.3=h27087fc_1
- nest-asyncio=1.5.6=py38h06a4308_0
- nettle=3.6=he412f7d_0
- networkx=2.8.8=pyhd8ed1ab_0
- notebook=6.5.4=py38h06a4308_1
- notebook-shim=0.2.2=py38h06a4308_0
- nspr=4.35=h6a678d5_0
- nss=3.74=h0370c37_0
- numexpr=2.7.3=py38h43a58ef_1
- numpy=1.23.4=py38h7042d01_1
- nvidia-ml=7.352.0=pyhd3eb1b0_0
- oauthlib=3.2.2=py38h06a4308_0
- omegaconf=2.3.0=pyhd8ed1ab_0
- openh264=2.1.1=h780b84a_0
- openjpeg=2.5.0=h7d73246_1
- openssl=3.0.10=h7f8727e_2
- orc=1.7.4=hb3bc3d3_1
- pandocfilters=1.5.0=pyhd3eb1b0_0
- parso=0.8.3=pyhd3eb1b0_0
- pcre=8.45=h295c915_0
- pexpect=4.8.0=pyhd3eb1b0_3
- pickleshare=0.7.5=pyhd3eb1b0_1003
- pillow=9.4.0=py38h6a678d5_0
- pip=22.3.1=pyhd8ed1ab_0
- pkgutil-resolve-name=1.3.10=py38h06a4308_0
- platformdirs=3.1.1=pyhd8ed1ab_0
- ply=3.11=py38_0
- pooch=1.7.0=pyha770c72_3
- prometheus_client=0.14.1=py38h06a4308_0
- prompt-toolkit=3.0.36=py38h06a4308_0
- prompt_toolkit=3.0.36=hd3eb1b0_0
- protobuf=3.20.3=py38h6a678d5_0
- psutil=5.9.4=py38h0a891b7_0
- pthread-stubs=0.4=h36c2ea0_1001
- ptyprocess=0.7.0=pyhd3eb1b0_2
- pure_eval=0.2.2=pyhd3eb1b0_0
- pyarrow=11.0.0=py38h468efa6_1
- pyasn1=0.4.8=pyhd3eb1b0_0
- pyasn1-modules=0.2.8=py_0
- pycparser=2.21=pyhd8ed1ab_0
- pygments=2.15.1=py38h06a4308_1
- pyjwt=2.4.0=py38h06a4308_0
- pyopenssl=22.1.0=pyhd8ed1ab_0
- pyparsing=3.0.9=py38h06a4308_0
- pyqt=5.15.7=py38h6a678d5_1
- pyqt5-sip=12.11.0=py38h6a678d5_1
- pyrsistent=0.18.0=py38heee7806_0
- pysocks=1.7.1=pyha2e5f31_6
- python=3.8.13=ha86cf86_0_cpython
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python-fastjsonschema=2.16.2=py38h06a4308_0
- python-json-logger=2.0.7=py38h06a4308_0
- python-tzdata=2023.3=pyhd3eb1b0_0
- python-xxhash=2.0.2=py38h5eee18b_1
- python_abi=3.8=2_cp38
- pytorch-mutex=1.0=cuda
- pytz=2022.7=py38h06a4308_0
- pyyaml=6.0=py38h5eee18b_1
- pyzmq=24.0.1=py38hfc09fa9_1
- qt-main=5.15.2=h327a75a_7
- qt-webengine=5.15.9=hd2b0992_4
- qtconsole=5.4.2=py38h06a4308_0
- qtpy=2.2.0=py38h06a4308_0
- qtwebkit=5.212=h4eab89a_4
- re2=2022.04.01=h295c915_0
- readline=8.1.2=h0f457ee_0
- regex=2022.7.9=py38h5eee18b_0
- requests=2.28.1=pyhd8ed1ab_1
- requests-oauthlib=1.3.0=py_0
- responses=0.13.3=pyhd3eb1b0_0
- rfc3339-validator=0.1.4=py38h06a4308_0
- rfc3986-validator=0.1.1=py38h06a4308_0
- rsa=4.7.2=pyhd3eb1b0_1
- safetensors=0.3.2=py38hb02cf49_0
- seaborn=0.12.2=py38h06a4308_0
- send2trash=1.8.0=pyhd3eb1b0_1
- setuptools=65.5.1=pyhd8ed1ab_0
- sip=6.6.2=py38h6a678d5_0
- six=1.16.0=pyhd3eb1b0_1
- snappy=1.1.9=h295c915_0
- sniffio=1.2.0=py38h06a4308_1
- soupsieve=2.4=py38h06a4308_0
- sqlite=3.39.4=h4ff8645_0
- stack_data=0.2.0=pyhd3eb1b0_0
- tbb=2021.6.0=h924138e_1
- tensorboard=2.12.1=py38h06a4308_0
- tensorboard-data-server=0.7.0=py38h52d8a92_0
- tensorboard-plugin-wit=1.8.1=py38h06a4308_0
- terminado=0.17.1=py38h06a4308_0
- tinycss2=1.2.1=py38h06a4308_0
- tk=8.6.12=h27826a3_0
- tokenizers=0.13.2=py38h22610ee_1
- toml=0.10.2=pyhd3eb1b0_0
- tomli=2.0.1=py38h06a4308_0
- torchaudio=0.12.1=py38_cu113
- torchmetrics=0.11.4=py38h2f386ee_1
- torchvision=0.13.1=py38_cu113
- tornado=6.3.2=py38h5eee18b_0
- tqdm=4.64.1=pyhd8ed1ab_0
- traitlets=5.7.1=py38h06a4308_0
- transformers=4.32.1=py38h06a4308_0
- typing-extensions=4.4.0=hd8ed1ab_0
- typing_extensions=4.4.0=pyha770c72_0
- urllib3=1.26.11=pyhd8ed1ab_0
- utf8proc=2.6.1=h27cfd23_0
- wcwidth=0.2.5=pyhd3eb1b0_0
- webencodings=0.5.1=py38_1
- websocket-client=0.58.0=py38h06a4308_4
- werkzeug=2.2.3=py38h06a4308_0
- wheel=0.38.3=pyhd8ed1ab_0
- widgetsnbextension=4.0.5=py38h06a4308_0
- xorg-libxau=1.0.9=h7f98852_0
- xorg-libxdmcp=1.1.3=h7f98852_0
- xxhash=0.8.0=h7f8727e_3
- xz=5.2.6=h166bdaf_0
- y-py=0.5.9=py38h52d8a92_0
- yaml=0.2.5=h7b6447c_0
- yarl=1.8.1=py38h5eee18b_0
- ypy-websocket=0.8.2=py38h06a4308_0
- zeromq=4.3.4=h2531618_0
- zipp=3.11.0=py38h06a4308_0
- zlib=1.2.13=h166bdaf_4
- zstd=1.5.2=h6239696_4
- pip:
- accelerate==0.23.0
- biopython==1.81
- cmake==3.27.4.1
- e3nn==0.5.1
- h5py==3.9.0
- imbalanced-learn==0.7.0
- imblearn==0.0
- joblib==1.2.0
- lit==16.0.6
- mpmath==1.2.1
- nvidia-cublas-cu11==11.10.3.66
- nvidia-cuda-cupti-cu11==11.7.101
- nvidia-cuda-nvrtc-cu11==11.7.99
- nvidia-cuda-runtime-cu11==11.7.99
- nvidia-cudnn-cu11==8.5.0.96
- nvidia-cufft-cu11==10.9.0.58
- nvidia-curand-cu11==10.2.10.91
- nvidia-cusolver-cu11==11.4.0.1
- nvidia-cusparse-cu11==11.7.4.91
- nvidia-nccl-cu11==2.14.3
- nvidia-nvtx-cu11==11.7.91
- opt-einsum==3.3.0
- opt-einsum-fx==0.1.4
- packaging==22.0
- pandas==1.5.2
- peft==0.5.0
- pyloras==0.1.0b5
- scikit-learn==1.2.0
- scipy==1.9.3
- sympy==1.11.1
- threadpoolctl==3.1.0
- torch==2.0.1
- triton==2.0.0