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@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

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  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 231 52

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 47 4

  3. MAxO MAxO Public

    Medical action ontology

    HTML 51 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 14 1

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Vue 17 4

Repositories

Showing 10 of 234 repositories
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 231 CC-BY-4.0 52 392 (2 issues need help) 32 Updated Oct 11, 2024
  • monarch-app Public

    Monarch Initiative website and API

    monarch-initiative/monarch-app’s past year of commit activity
    Vue 17 BSD-3-Clause 4 158 (3 issues need help) 11 Updated Oct 11, 2024
  • phenopacket2prompt Public

    GA4GH Phenopacket to LLM prompt

    monarch-initiative/phenopacket2prompt’s past year of commit activity
    Java 2 MIT 1 3 2 Updated Oct 11, 2024
  • malco Public

    Multilingual Analysis of LLMs for Clinical Observations

    monarch-initiative/malco’s past year of commit activity
    Jupyter Notebook 3 BSD-3-Clause 0 5 1 Updated Oct 11, 2024
  • monarch-phenotype-profile-ingest Public

    human phenotype related ingests

    monarch-initiative/monarch-phenotype-profile-ingest’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Oct 11, 2024
  • ontogpt Public

    LLM-based ontological extraction tools, including SPIRES

    monarch-initiative/ontogpt’s past year of commit activity
    Jupyter Notebook 591 BSD-3-Clause 74 57 7 Updated Oct 10, 2024
  • ncbi-gene Public
    monarch-initiative/ncbi-gene’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Oct 10, 2024
  • gpsea Public

    A Python library for discovery of genotype-phenotype associations

    monarch-initiative/gpsea’s past year of commit activity
    Python 4 MIT 1 32 1 Updated Oct 10, 2024
  • curategpt Public

    LLM-driven curation assist tool (pre-alpha)

    monarch-initiative/curategpt’s past year of commit activity
    Jupyter Notebook 58 BSD-3-Clause 11 21 5 Updated Oct 9, 2024
  • monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    monarch-initiative/monarch-ingest’s past year of commit activity
    Python 14 1 31 5 Updated Oct 9, 2024
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