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Releases: nanoporetech/fast-ctc-decode

v0.3.6

v0.3.5

01 Apr 20:19
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--config net.git-fetch-with-cli=true

v0.3.2

10 Apr 11:10
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  • PyPI (+py3.10) & NPM builds.

v0.3.1

28 Oct 12:24
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  • add wasm builds.

v0.3.0

25 Mar 18:43
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  • options for none collapsing repeats with CTC search functions.
  • greedy, beam, & duplex search for CTC-CRF transitions posteriors probability outputs.
  • all search method no longer hold the Python GIL so can benefit from Python multithreading.
  • Python3.5 supported dropped; Python 3.9 builds added.

v0.2.5

17 Apr 17:42
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  • 2D Beam search
  • Viterbi search.
    • Optional phred quality scores.

v0.2.4

05 Apr 17:24
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  • Support for multi-character labels (alphabet can now be any PySequence type).
  • On encountering NaNs a RuntimeError is raised.

v0.2.3

19 Mar 14:49
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Performance improvements

v0.2.2

13 Mar 16:05
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Better handling on boundary conditions.

v0.2.1

01 Mar 11:16
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Better paths are produced over repeated labels.