Feat/prepare edit site component & some visits (#43)

* refactor: object.service with observable obj Change the objectType string to objectType obj in order to subscribe to multilple properties link to this object Reviewed-by: andriacap [Refs_ticket]: #40 * feat: adapt service to get config json Get fieldsName and fieldsLabel for display properties (properties component) Add logic to setItem in LocalStorage to keepLast Value of observable on reload page TODO: - [ ] see if Localstorage is really necessary with the configService used inside api-geom.service ) - [ ] adapt monitoring-form-g.component with the new service Reviewed-by: andriacap [Refs ticket]: #4 * feat: column datatable from config json Add logic into sitegroups service in order to use config json to diplay column datatable (called "display_list") Review-by: andriac [Refs ticket]: #4 * feat: adjust backend to load config json Adjust backend code to use existing code in order to load config from file json and by starting with "sites_group" Fix Media load and upload for site_group TODO: - [ ] check if config should be find from file or backend - [ ] Optimize logic backend (use generic model with class method ?) Reviewed-by: andriacap [Refs ticket]: #4 * feat: add button multiselect with filter on backend filter with params backend (new route -> see if it's possible to change that) Add button multiselect above form type site TODO: - improve Input / condition of use case of btn multiselect Reviewed-by: andriac * feat: btn multiselect option -Add @input fn , placeholder, title, paramsToFilt -Remove empty option -prevent adding from keyboard input or not including in list -Store config json into object Reviewed-by: @AndriaC [Refs-ticket]: #4 * refactor: change form-service and object-service refactor form-service add observable into object-service (WIP: futur use for refresh page ?) Rieviewed-by: andriac [Refs_ticket]: #40 * refactor: test refresh page and comportment obs refresh page seems to works with localstorage of different obj in object_service Reviewed-by: andriac * feat: dynamic form - Add: - pass config json to form.component-g.ts - add config json to this.obj and refresh form into form.component-g.ts - add css for form component to deal when long form selected -fix : - refresh page form component (this._configService.init is necessary ...) - comportment different between add or edit into form component and form service Reviewed-by: andriac [Refs_ticket]: #4 * feat: dynamic form - Correction PR Remove unused console.log Rxjs : use concatMap to avoid subscribe inside subscribe Apply: prettier and sort prettier for import ts file Reviewed-by: @AndriaC [Refs_PR]: #42 * feat: dynamic create site - Add change current-object when click "Add <object>" from datatable component - api-geom.service: change the way to init the api-geom - WIP: two subscribes in one .. (the subscription is call only once ..) - WIP : get config json from backend Reviewed-by: andriac * feat: add relationship id into sendData form site Add type_site and id_site_group to the form site Reviewed-by: andriac [Refs_ticket]: #5 et #6 * feat(back): add custom config when post site Change backend files in order to choose specific config when site is created. Reviewed-by: andriac [Refs_ticket]: #5 , #6 * fix: problem of type object when loading form Add endPoint and objectType to the observable using by the formservice in order to use _apiGeomService with good context (endPoint) [Refs_ticket]: #5 et #6 * fix: tooltip and label inside datatable-component Add a childLabel inside interface objObs.ts in order to use this tooltip inside datatable-component * feat: get back work visitcomponent get back work from feat/visit to use visitcomponent but adapted to current branch [Refs_ticket]: #5 , #6 * fix: forgot 3 modifications needed from feat/site Add conftest visit Add test_get_visits Add get_site_by_id * fix: passing data between components and property - Action button "consult..." is working for group_site and site - Action with button "cancel" , "come back history routing" send to the right component - Label and tooltip are according to the parent and child object loaded in the corresponding component - Action "Add site" directly from datatable-g.component (WIP: need to remove send to sites_group/:id/create [Refs_ticket]: #40 , #4 , #5 and #6 * fix: error of url relative when using form Fix problem of id_module has ["id_module"] in create_or_update_object_api function Fix path "sites/:id" to "site/:id" Add urlRelative when editing component * fix: problem route navigation Remove unused "urlRelative" create in last commit Fix the action "add children" in datatable to redirect to the good component Change the way to redirect when cancel and delete on form component based on last url [Refs_ticket]: #40 * refactor: object.service with observable obj Change the objectType string to objectType obj in order to subscribe to multilple properties link to this object Reviewed-by: andriacap [Refs_ticket]: #40 * feat: adapt service to get config json Get fieldsName and fieldsLabel for display properties (properties component) Add logic to setItem in LocalStorage to keepLast Value of observable on reload page TODO: - [ ] see if Localstorage is really necessary with the configService used inside api-geom.service ) - [ ] adapt monitoring-form-g.component with the new service Reviewed-by: andriacap [Refs ticket]: #4 * feat: column datatable from config json Add logic into sitegroups service in order to use config json to diplay column datatable (called "display_list") Review-by: andriac [Refs ticket]: #4 * feat: adjust backend to load config json Adjust backend code to use existing code in order to load config from file json and by starting with "sites_group" Fix Media load and upload for site_group TODO: - [ ] check if config should be find from file or backend - [ ] Optimize logic backend (use generic model with class method ?) Reviewed-by: andriacap [Refs ticket]: #4 * feat: add button multiselect with filter on backend filter with params backend (new route -> see if it's possible to change that) Add button multiselect above form type site TODO: - improve Input / condition of use case of btn multiselect Reviewed-by: andriac * feat: btn multiselect option -Add @input fn , placeholder, title, paramsToFilt -Remove empty option -prevent adding from keyboard input or not including in list -Store config json into object Reviewed-by: @AndriaC [Refs-ticket]: #4 * refactor: change form-service and object-service refactor form-service add observable into object-service (WIP: futur use for refresh page ?) Rieviewed-by: andriac [Refs_ticket]: #40 * refactor: test refresh page and comportment obs refresh page seems to works with localstorage of different obj in object_service Reviewed-by: andriac * feat: dynamic form - Add: - pass config json to form.component-g.ts - add config json to this.obj and refresh form into form.component-g.ts - add css for form component to deal when long form selected -fix : - refresh page form component (this._configService.init is necessary ...) - comportment different between add or edit into form component and form service Reviewed-by: andriac [Refs_ticket]: #4 * feat: dynamic form - Correction PR Remove unused console.log Rxjs : use concatMap to avoid subscribe inside subscribe Apply: prettier and sort prettier for import ts file Reviewed-by: @AndriaC [Refs_PR]: #42 * feat: dynamic create site - Add change current-object when click "Add <object>" from datatable component - api-geom.service: change the way to init the api-geom - WIP: two subscribes in one .. (the subscription is call only once ..) - WIP : get config json from backend Reviewed-by: andriac * feat: add relationship id into sendData form site Add type_site and id_site_group to the form site Reviewed-by: andriac [Refs_ticket]: #5 et #6 * feat(back): add custom config when post site Change backend files in order to choose specific config when site is created. Reviewed-by: andriac [Refs_ticket]: #5 , #6 * fix: tooltip and label inside datatable-component Add a childLabel inside interface objObs.ts in order to use this tooltip inside datatable-component * feat: get back work visitcomponent get back work from feat/visit to use visitcomponent but adapted to current branch [Refs_ticket]: #5 , #6 * fix: forgot 3 modifications needed from feat/site Add conftest visit Add test_get_visits Add get_site_by_id * fix: passing data between components and property - Action button "consult..." is working for group_site and site - Action with button "cancel" , "come back history routing" send to the right component - Label and tooltip are according to the parent and child object loaded in the corresponding component - Action "Add site" directly from datatable-g.component (WIP: need to remove send to sites_group/:id/create [Refs_ticket]: #40 , #4 , #5 and #6 * fix: error of url relative when using form Fix problem of id_module has ["id_module"] in create_or_update_object_api function Fix path "sites/:id" to "site/:id" Add urlRelative when editing component * fix: fix things broken by rebase * chore: remove useless file * chore(front): remove file/comment/console.log --------- Co-authored-by: Andria Capai <[email protected]>
naturalsolutions · Oct 5, 2023 · 5984dbb · 5984dbb
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diff --git a/backend/gn_module_monitoring/config/generic/site.json b/backend/gn_module_monitoring/config/generic/site.json
@@ -58,13 +58,6 @@
       "type_util": "user",
       "required": true
     },
-    "id_digitiser": {
-      "type_widget": "text",
-      "attribut_label": "Numérisateur",
-      "required": true,
-      "hidden": true,
-      "type_util": "user"
-    },
     "first_use_date": {
       "type_widget": "date",
       "attribut_label": "Date description",
@@ -89,11 +82,11 @@
       "type_widget": "integer",
       "attribut_label": "Altitude (min)"
       },
-      "altitude_max": {
+    "altitude_max": {
       "type_widget": "integer",
       "attribut_label": "Altitude (max)"
       },
-      "id_sites_group": {
+    "id_sites_group": {
         "type_widget": "integer",
         "attribut_label": "ID Sites Groups",
         "hidden": true,

diff --git a/backend/gn_module_monitoring/monitoring/models.py b/backend/gn_module_monitoring/monitoring/models.py
@@ -171,13 +171,13 @@ class TMonitoringObservations(TObservations):
 
 
 @serializable
-class TMonitoringVisits(TBaseVisits):
+class TMonitoringVisits(TBaseVisits, GenericModel):
     __tablename__ = "t_visit_complements"
     __table_args__ = {"schema": "gn_monitoring"}
     __mapper_args__ = {
         "polymorphic_identity": "monitoring_visit",
     }
-
+    query_class = MonitoringQuery
     id_base_visit = DB.Column(
         DB.ForeignKey("gn_monitoring.t_base_visits.id_base_visit"),
         nullable=False,
@@ -210,10 +210,20 @@ class TMonitoringVisits(TBaseVisits):
     )
 
 
+    module = DB.relationship(
+        TModules,
+        lazy="select",
+        primaryjoin=(TModules.id_module == TBaseVisits.id_module),
+        foreign_keys=[TModules.id_module],
+        uselist=False,
+    )
+
+
 @geoserializable(geoCol="geom", idCol="id_base_site")
-class TMonitoringSites(TBaseSites):
-    __tablename__ = "t_site_complements"
-    __table_args__ = {"schema": "gn_monitoring"}
+class TMonitoringSites(TBaseSites, GenericModel):
+
+    __tablename__ = 't_site_complements'
+    __table_args__ = {'schema': 'gn_monitoring'}
     __mapper_args__ = {
         "polymorphic_identity": "monitoring_site",
     }

diff --git a/backend/gn_module_monitoring/monitoring/schemas.py b/backend/gn_module_monitoring/monitoring/schemas.py
@@ -3,12 +3,13 @@
 import geojson
 from geonature.utils.env import MA
 from marshmallow import Schema, fields, validate
-from geonature.core.gn_commons.schemas import MediaSchema
+from geonature.core.gn_commons.schemas import MediaSchema, ModuleSchema
 
 from gn_module_monitoring.monitoring.models import (
     BibTypeSite,
     TMonitoringSites,
     TMonitoringSitesGroups,
+    TMonitoringVisits
 )
 
 
@@ -51,11 +52,14 @@ class Meta:
         exclude = ("geom_geojson", "geom")
 
     geometry = fields.Method("serialize_geojson", dump_only=True)
+    pk = fields.Method("set_pk",dump_only=True)
 
     def serialize_geojson(self, obj):
         if obj.geom is not None:
             return geojson.dumps(obj.as_geofeature().get("geometry"))
-
+
+    def set_pk(self,obj):
+        return self.Meta.model.get_id()
 
 class BibTypeSiteSchema(MA.SQLAlchemyAutoSchema):
     label = fields.Method("get_label_from_type_site")
@@ -69,3 +73,12 @@ class Meta:
         model = BibTypeSite
         include_fk = True
         load_instance = True
+
+class MonitoringVisitsSchema(MA.SQLAlchemyAutoSchema):
+    class Meta:
+        model = TMonitoringVisits
+    pk = fields.Method("set_pk",dump_only=True)
+    module = MA.Nested(ModuleSchema)
+
+    def set_pk(self,obj):
+        return self.Meta.model.get_id()
diff --git a/backend/gn_module_monitoring/routes/site.py b/backend/gn_module_monitoring/routes/site.py
@@ -6,6 +6,7 @@
 from gn_module_monitoring.config.repositories import get_config
 from gn_module_monitoring.monitoring.models import BibTypeSite, TMonitoringSites, TNomenclatures
 from gn_module_monitoring.monitoring.schemas import BibTypeSiteSchema, MonitoringSitesSchema
+from gn_module_monitoring.routes.sites_groups import create_or_update_object_api
 from gn_module_monitoring.utils.routes import (
     create_or_update_object_api_sites_sites_group,
     filter_params,
@@ -85,6 +86,11 @@ def get_sites():
         page=page,
     )
 
+@blueprint.route("/sites/<int:id_base_site>", methods=["GET"])
+def get_site_by_id(id_base_site):
+    site = TMonitoringSites.query.get_or_404(id_base_site)
+    schema = MonitoringSitesSchema()
+    return schema.dump(site)
 
 @blueprint.route("/sites/geometries", methods=["GET"])
 def get_all_site_geometries():

diff --git a/backend/gn_module_monitoring/routes/sites_groups.py b/backend/gn_module_monitoring/routes/sites_groups.py
@@ -103,3 +103,47 @@ def handle_validation_error(error):
         status_code=422,
         payload=error.data,
     ).to_dict()
+
+
+# TODO: OPTIMIZE in order to adapt to new monitoring module (entry by sites_groups)
+
+
+def create_or_update_object_api(module_code, object_type, id=None):
+    """
+    route pour la création ou la modification d'un objet
+    si id est renseigné, c'est une création (PATCH)
+    sinon c'est une modification (POST)
+
+    :param module_code: reference le module concerne
+    :param object_type: le type d'object (site, visit, obervation)
+    :param id : l'identifiant de l'object (de id_base_site pour site)
+    :type module_code: str
+    :type object_type: str
+    :type id: int
+    :return: renvoie l'object crée ou modifié
+    :rtype: dict
+    """
+    depth = to_int(request.args.get("depth", 1))
+
+    # recupération des données post
+    post_data = dict(request.get_json())
+    if module_code != "generic":
+        module = get_module("module_code", module_code)
+    else:
+        module = {"id_module": "generic"}
+        #TODO : A enlever une fois que le post_data contiendra geometry et type depuis le front
+        if object_type == "site":
+            post_data["geometry"]={'type':'Point', 'coordinates':[2.5,50]}
+            post_data["type"]='Feature'
+    # on rajoute id_module s'il n'est pas renseigné par défaut ??
+    if "id_module" not in post_data["properties"]:
+        module["id_module"] = "generic"
+        post_data["properties"]["id_module"] = module["id_module"]
+    else:
+        post_data["properties"]["id_module"] = module["id_module"]
+
+    return (
+        monitoring_g_definitions.monitoring_object_instance(module_code, object_type, id)
+        .create_or_update(post_data)
+        .serialize(depth)
+    )
diff --git a/backend/gn_module_monitoring/routes/visit.py b/backend/gn_module_monitoring/routes/visit.py
@@ -0,0 +1,35 @@
+from flask import request
+from sqlalchemy.orm import joinedload
+from werkzeug.datastructures import MultiDict
+
+from gn_module_monitoring.blueprint import blueprint
+from gn_module_monitoring.monitoring.models import TMonitoringVisits
+from gn_module_monitoring.monitoring.schemas import MonitoringVisitsSchema
+from gn_module_monitoring.utils.routes import (
+    filter_params,
+    get_limit_page,
+    get_sort,
+    paginate,
+    sort,
+)
+
+# Retrieves visits that do not depend on modules
+
+
+@blueprint.route("/visits", methods=["GET"])
+def get_visits():
+    params = MultiDict(request.args)
+    limit, page = get_limit_page(params=params)
+    sort_label, sort_dir = get_sort(
+        params=params, default_sort="id_base_visit", default_direction="desc"
+    )
+    query = TMonitoringVisits.query.options(joinedload(TMonitoringVisits.module))
+    query = filter_params(query=TMonitoringVisits.query, params=params)
+    query = sort(query=query, sort=sort_label, sort_dir=sort_dir)
+
+    return paginate(
+        query=query,
+        schema=MonitoringVisitsSchema,
+        limit=limit,
+        page=page,
+    )
diff --git a/backend/gn_module_monitoring/tests/conftest.py b/backend/gn_module_monitoring/tests/conftest.py
@@ -6,4 +6,5 @@
     "gn_module_monitoring.tests.fixtures.site",
     "gn_module_monitoring.tests.fixtures.sites_groups",
     "gn_module_monitoring.tests.fixtures.type_site",
+    "gn_module_monitoring.tests.fixtures.visit",
 ]
diff --git a/backend/gn_module_monitoring/tests/fixtures/visit.py b/backend/gn_module_monitoring/tests/fixtures/visit.py
@@ -0,0 +1,27 @@
+import datetime
+
+import pytest
+from geonature.tests.fixtures import datasets
+from geonature.utils.env import db
+
+from gn_module_monitoring.monitoring.models import TMonitoringVisits
+
+
+@pytest.fixture
+def visits(module, users, types_site, sites, datasets):
+    now = datetime.datetime.now()
+    dataset = datasets["orphan_dataset"]
+    db_visits = []
+    for site in sites.values():
+        db_visits.append(
+            TMonitoringVisits(
+                id_base_site=site.id_base_site,
+                id_module=module.id_module,
+                id_dataset=dataset.id_dataset,
+                visit_date_min=now,
+            )
+        )
+    with db.session.begin_nested():
+        db.session.add_all(db_visits)
+
+    return db_visits
diff --git a/backend/gn_module_monitoring/tests/test_routes/test_visit.py b/backend/gn_module_monitoring/tests/test_routes/test_visit.py
@@ -0,0 +1,29 @@
+import pytest
+from flask import url_for
+
+
+@pytest.mark.usefixtures("client_class", "temporary_transaction")
+class TestVisits:
+    def test_get_visits(self, visits):
+        r = self.client.get(
+            url_for(
+                "monitorings.get_visits",
+            )
+        )
+
+        expected_visits = {visit.id_base_visit for visit in visits}
+        current_visits = {visit["id_base_visit"] for visit in r.json["items"]}
+        assert expected_visits.issubset(current_visits)
+        assert all(visit["module"] is not None for visit in r.json["items"])
+
+    def test_get_visits_with_site(self, visits, sites):
+        site = list(sites.values())[0]
+
+        r = self.client.get(url_for("monitorings.get_visits", id_base_site=site.id_base_site))
+
+        expected_visits = {
+            visit.id_base_visit for visit in visits if visit.id_base_site == site.id_base_site
+        }
+        current_visits = {visit["id_base_visit"] for visit in r.json["items"]}
+
+        assert expected_visits.issubset(current_visits)
diff --git a/frontend/app/class/monitoring-visit.ts b/frontend/app/class/monitoring-visit.ts
@@ -0,0 +1,6 @@
+export enum columnNameVisit {
+  id_module = "Protocol ID",
+  visit_date_max = "Date max",
+  visit_date_min = "Date min",
+  nb_observations = "Nb. observations",
+}
diff --git a/frontend/app/components/monitoring-datatable-g/monitoring-datatable-g.component.html b/frontend/app/components/monitoring-datatable-g/monitoring-datatable-g.component.html
@@ -52,15 +52,15 @@
         <a
           class="nav-link link cell-link"
           (click)="navigateToDetail(row)"
-          matTooltip="Consulter le groupe de site"
+          matTooltip="Consulter le {{ objectType.label }}"
         >
           <i class="fa fa-eye" aria-hidden="true"></i>
         </a>
         <!-- TODO Action Column :  Changer ngIf, click function, matTooltip // voir comment adapter à ce qu'il y avait avant :  *ngIf="child0.child0()"" et dans la function `child0.child0().labelArtUndef(true)` -->
         <a
           class="nav-link link cell-link"
-          (click)="navigateToAddChildren(null, row.id)"
-          matTooltip="Ajouter un site "
+          (click)="navigateToAddChildren(null, row)"
+          matTooltip=" {{objectType.addChildLabel}}"
         >
           <i class="fa fa-plus" aria-hidden="true"></i>
         </a>

diff --git a/frontend/app/components/monitoring-datatable-g/monitoring-datatable-g.component.ts b/frontend/app/components/monitoring-datatable-g/monitoring-datatable-g.component.ts
@@ -186,12 +186,20 @@ export class MonitoringDatatableGComponent implements OnInit {
       }
     }
   }
-  navigateToAddChildren(_, rowId) {
-    this.addEvent.emit(rowId);
+  navigateToAddChildren(_, row) {
+    this.addEvent.emit(row);
     this._objService.changeObjectType(this.objectType);
-    this.router.navigate(['create'], {
-      relativeTo: this._Activatedroute,
-    });
+    if (row){
+      row['id'] = row[row.pk];
+      this.router.navigate([row.id,'create'], {
+        relativeTo: this._Activatedroute,
+      });
+    } else {
+      this.router.navigate(['create'], {
+        relativeTo: this._Activatedroute,
+      });
+    }
+
   }
   navigateToDetail(row) {
     row['id'] = row.pk;