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bump version number
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Jon Palmer committed May 19, 2018
1 parent 7347659 commit c32453b
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions funannotate.py
Original file line number Diff line number Diff line change
Expand Up @@ -37,7 +37,7 @@ def fmtcols(mylist, cols):
pass

git_version = lib.git_version()
base_version = '1.3.1'
base_version = '1.3.2'
if git_version:
version = base_version+'-'+git_version
else:
Expand Down Expand Up @@ -419,9 +419,9 @@ def fmtcols(mylist, cols):
--run_dnds Calculate dN/dS ratio on all orthologs. [estimate,full]
--go_fdr P-value for FDR GO-enrichment. Default: 0.05
--heatmap_stdev Cut-off for heatmap. Default: 1.0
--num_orthos Number of Single-copy orthologs to use for RAxML. Default: 500
--num_orthos Number of Single-copy orthologs to use for ML. Default: 500
--bootstrap Number of boostrap replicates to run with RAxML. Default: 100
--outgroup Name of species to use for RAxML outgroup. Default: no outgroup
--outgroup Name of species to use for ML outgroup. Default: no outgroup
--proteinortho ProteinOrtho5 POFF results.
--ml_method Maxmimum Liklihood method: Default: raxml [raxml,iqtree]
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