3.2.1 Release Candidiate #562

Run time

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Job	Run time
Run standard pipeline test (23.04.0)	9m 29s
Run standard pipeline test	8m 24s
Run standard pipeline test (edge version)	8m 34s
Run extended pipeline test (23.04.0)	17m 44s
Run extended pipeline test	17m 20s
23.04.0 test_genome_options	5m 12s
23.04.0 test_genome_options_spikein	8m 30s
23.04.0 test_samplesheet	14m 18s
23.04.0 test_samplesheet_2	3m 3s
23.04.0 test_samplesheet_3	1m 3s
23.04.0 test_filtering_noqfilter	4m 45s
23.04.0 test_filtering_withqfilter	5m 1s
23.04.0 test_bam_scale_none	4m 6s
23.04.0 test_bam_scale_spikein	4m 18s
23.04.0 test_bam_scale_cpm	3m 43s
23.04.0 test_bam_scale_rpkm	4m 34s
23.04.0 test_bam_scale_bpm	4m 8s
23.04.0 test_bam_scale_cpm_iggscale	3m 39s
23.04.0 test_peak_callers_seacr	10m 15s
23.04.0 test_peak_callers_macs2	11m 21s
23.04.0 test_peak_callers_invalid	43s
23.04.0 test_peak_callers_seacr_macs2	5m 42s
23.04.0 test_peak_callers_macs2_seacr	3m 47s
23.04.0 test_peak_callers_seacr_macs2_noigg	3m 57s
23.04.0 test_peak_callers_ctrl_tests	9m 12s
23.04.0 test_consensus_peaks_group	7m 21s
23.04.0 test_consensus_peaks_all	7m 25s
23.04.0 test_consensus_peaks_invalid	38s
23.04.0 verify_output_only_input	56s
23.04.0 verify_output_save_merged	1m 44s
23.04.0 verify_output_save_trimmed	1m 57s
23.04.0 verify_output_skip_trimming	1m 22s
23.04.0 verify_output_skip_fastqc	1m 30s
23.04.0 verify_output_save_ref	1m 27s
23.04.0 verify_output_align_only_align	3m 28s
23.04.0 verify_output_align_only_align_end_to_end	2m 48s
23.04.0 verify_output_align_only_align_local	2m 13s
23.04.0 verify_output_align_intermed	4m 39s
23.04.0 verify_output_align_save_spikein_align	2m 57s
23.04.0 verify_output_align_save_unaligned	3m 0s
23.04.0 verify_output_align_duplicates_mark	5m 3s
23.04.0 verify_output_align_duplicates_remove	4m 23s
23.04.0 verify_output_align_duplicates_remove_target	6m 2s
23.04.0 verify_output_align_linear_duplicates_remove	5m 21s
23.04.0 verify_output_align_linear_duplicates_remove_target	5m 18s
23.04.0 verify_output_only_filtering	8m 49s
23.04.0 verify_output_only_filtering_with_mitochondrial_reads	4m 44s
23.04.0 verify_output_only_filtering_without_mitochondrial_reads	4m 38s
23.04.0 verify_output_only_filtering_without_mitochondrial_reads_mito_name_null	5m 3s
23.04.0 verify_output_peak_calling_only_peak_calling	8m 0s
23.04.0 verify_output_reporting_skip_preseq_false	6m 53s
23.04.0 verify_output_reporting_skip_preseq_true	6m 33s
23.04.0 verify_output_reporting_skip_dtqc_false	21m 43s
23.04.0 verify_output_reporting_skip_dtqc_true	16m 48s
23.04.0 verify_output_reporting_skip_heatmaps_false	8m 2s
23.04.0 verify_output_reporting_skip_heatmaps_true	5m 6s
23.04.0 verify_output_reporting_skip_heatmaps_grouped	7m 6s
23.04.0 verify_output_reporting_skip_igv_false	9m 25s
23.04.0 verify_output_reporting_skip_igv_true	7m 27s
23.04.0 verify_output_reporting_skip_multiqc_false	10m 33s
23.04.0 verify_output_reporting_skip_multiqc_true	7m 52s
23.04.0 verify_output_reporting_skip_peak_qc_false	7m 51s
23.04.0 verify_output_reporting_skip_peak_qc_true	7m 42s
23.04.0 verify_output_reporting_skip_reporting	4m 58s
test_genome_options	4m 48s
test_genome_options_spikein	8m 29s
test_samplesheet	14m 6s
test_samplesheet_2	2m 53s
test_samplesheet_3	1m 15s
test_filtering_noqfilter	5m 15s
test_filtering_withqfilter	5m 22s
test_bam_scale_none	3m 13s
test_bam_scale_spikein	3m 48s
test_bam_scale_cpm	5m 9s
test_bam_scale_rpkm	4m 30s
test_bam_scale_bpm	4m 3s
test_bam_scale_cpm_iggscale	3m 40s
test_peak_callers_seacr	6m 36s
test_peak_callers_macs2	12m 7s
test_peak_callers_invalid	45s
test_peak_callers_seacr_macs2	3m 49s
test_peak_callers_macs2_seacr	3m 42s
test_peak_callers_seacr_macs2_noigg	3m 32s
test_peak_callers_ctrl_tests	11m 0s
test_consensus_peaks_group	8m 21s
test_consensus_peaks_all	7m 6s
test_consensus_peaks_invalid	30s
verify_output_only_input	1m 3s
verify_output_save_merged	1m 52s
verify_output_save_trimmed	1m 39s
verify_output_skip_trimming	1m 21s
verify_output_skip_fastqc	1m 27s
verify_output_save_ref	1m 14s
verify_output_align_only_align	4m 17s
verify_output_align_only_align_end_to_end	2m 45s
verify_output_align_only_align_local	2m 29s
verify_output_align_intermed	5m 54s
verify_output_align_save_spikein_align	3m 6s
verify_output_align_save_unaligned	2m 45s
verify_output_align_duplicates_mark	4m 2s
verify_output_align_duplicates_remove	4m 46s
verify_output_align_duplicates_remove_target	5m 32s
verify_output_align_linear_duplicates_remove	5m 31s
verify_output_align_linear_duplicates_remove_target	5m 38s
verify_output_only_filtering	7m 45s
verify_output_only_filtering_with_mitochondrial_reads	3m 40s
verify_output_only_filtering_without_mitochondrial_reads	3m 45s
verify_output_only_filtering_without_mitochondrial_reads_mito_name_null	4m 28s
verify_output_peak_calling_only_peak_calling	9m 23s
verify_output_reporting_skip_preseq_false	7m 17s
verify_output_reporting_skip_preseq_true	5m 41s
verify_output_reporting_skip_dtqc_false	16m 51s
verify_output_reporting_skip_dtqc_true	20m 48s
verify_output_reporting_skip_heatmaps_false	7m 9s
verify_output_reporting_skip_heatmaps_true	5m 34s
verify_output_reporting_skip_heatmaps_grouped	6m 16s
verify_output_reporting_skip_igv_false	7m 26s
verify_output_reporting_skip_igv_true	7m 14s
verify_output_reporting_skip_multiqc_false	10m 33s
verify_output_reporting_skip_multiqc_true	9m 14s
verify_output_reporting_skip_peak_qc_false	10m 5s
verify_output_reporting_skip_peak_qc_true	8m 57s
verify_output_reporting_skip_reporting	4m 36s
	12h 17m 35s

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3.2.1 Release Candidiate #562

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3.2.1 Release Candidiate #562

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