1.11.0

What's Changed

• remove public_aws_ecr by @maxulysse in #185
• Fix tests by @maxulysse in #187
• Adds emit statement for FASTQs and metadata to SRA workflow by @adamrtalbot in #184
• split up config files to be more modular by @maxulysse in #186
• Move out multiQC and versions by @maxulysse in #189
• tiny refactor by @maxulysse in #190
• Update SRA workflow tests by @maxulysse in #191
• update tests by @maxulysse in #192
• FEAT: add changes by @maxulysse in #193
• Recursively inherit configs by @adamrtalbot in #195
• remove all the nf-test logic from the refactor branch by @maxulysse in #198
• restore nf-test tests by @maxulysse in #200
• forgot this file by @maxulysse in #202
• fix path to file to include and update snapshots by @maxulysse in #203
• Trying out initialise by @maxulysse in #204
• Bump pipeline version to 1.11.0dev by @drpatelh in #211
• nf-test POC by @maxulysse in #201
• Per module/subworkflow tags.yml file by @adamrtalbot in #212
• Remove lib directory and replace with atomic subworkflows by @drpatelh in #213
• update modules and tests + fix linting by @maxulysse in #214
• FIX: custom/dumpsoftwareversions by @maxulysse in #215
• add pipeline level tests by @maxulysse in #216
• Tag and path updates for nf-test files by @drpatelh in #217
• Update workflows tests by @maxulysse in #218
• Update modules + tests by @maxulysse in #219
• Use nf-core nfvalidation subworkflow by @adamrtalbot in #222
• Update nextflowpipelineutils by @adamrtalbot in #224
• Use nf-core subworkflow: NFCORE_PIPELINE_UTILS by @adamrtalbot in #223
• Fix all by @maxulysse in #225
• fix sratools by @maxulysse in #227
• Replace CUSTOM_DUMPSOFTWAREVERSIONS with collectFile operator by @adamrtalbot in #226
• fix sratools and fewer ids by @maxulysse in #228
• Prepare 1.11.0 RC by @maxulysse in #230
• Refactor POC by @maxulysse in #188
• Release candidate 1.11.0 by @maxulysse in #231

Full Changelog: 1.10.1...1.11.0