Update SPAdes module to official nf-core and version bump #1790
Triggered via pull request
October 22, 2024 08:53
jfy133
Status
Cancelled
Total duration
18m 24s
Artifacts
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ci.yml
on: pull_request
Run single test to checkm due to database download
17m 55s
Matrix: Run workflow profile
Matrix: test
Annotations
20 errors and 6 warnings
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Run workflow profile (test_adapterremoval)
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Run workflow profile (test_adapterremoval)
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Run pipeline with test data (latest-everything | test | docker)
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Run pipeline with test data (latest-everything | test | docker)
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Run workflow profile (test_hybrid)
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Run workflow profile (test_hybrid_host_rm)
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Run workflow profile (test_hybrid_host_rm)
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Run workflow profile (test_host_rm)
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Run workflow profile (test_host_rm)
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Run pipeline with test data (24.04.2 | test | docker)
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Run pipeline with test data (24.04.2 | test | docker)
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Run workflow profile (test_binrefinement)
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Run workflow profile (test_busco_auto)
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Run workflow profile (test_ancient_dna)
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Run workflow profile (test_ancient_dna)
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Run single test to checkm due to database download
Canceling since a higher priority waiting request for 'nf-core CI-666' exists
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Run single test to checkm due to database download
The operation was canceled.
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Run workflow profile (test_single_end)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Run workflow profile (test_single_end)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run workflow profile (test_virus_identification)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Run workflow profile (test_virus_identification)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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Run workflow profile (test_concoct)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Run workflow profile (test_concoct)
The following actions use a deprecated Node.js version and will be forced to run on node20: actions/checkout@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
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